RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TRAFD1O14545 582 aaPredicted RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 KCNK3O14649 394 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 SPINT1O43278 529 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 TJP3O95049 919 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 HLA-DQB2P05538 268 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 UGT2B4P06133 528 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 MMP2P08253 660 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 ACADMP11310 421 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 OXTRP30559 389 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 HSPA9P38646 679 aaKnown RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 GDPD4Q6W3E5 623 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 BZW1Q7L1Q6 419 aaKnown RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 PARS2Q7L3T8 475 aaKnown RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 FAM124AQ86V42 546 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 ZC3H18Q86VM9 953 aaKnown RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 SLC13A5Q86YT5 568 aaPredicted RBP13.91□□□□□ -0.18
VRK3-219ENST00000600137 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 ECHDC3Q96DC8 303 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 KLHL32Q96NJ5 620 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 NUDCD1Q96RS6 583 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 HDAC8Q9BY41 377 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 SEMA4AQ9H3S1 761 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 SUV39H2Q9H5I1 410 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 USP29Q9HBJ7 922 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 NOD2Q9HC29 1040 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 DKK3Q9UBP4 350 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 AMACRQ9UHK6 382 aa13.91□□□□□ -0.18
VRK3-219ENST00000600137 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 TSPAN11A1L157 253 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 C16orf96A6NNT2 1141 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 HACD1B0YJ81 288 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 KPNA3O00505 521 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 HTRA2O43464 458 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 PLRG1O43660 514 aaKnown RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 RNASEH2AO75792 299 aaKnown RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 PIGNO95427 931 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 TIMP2P16035 220 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ITIH2P19823 946 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ITGB7P26010 798 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 PTPN3P26045 913 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 RBL1P28749 1068 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 CXCR5P32302 372 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 CD68P34810 354 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 PTGER3P43115 390 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 SCNN1BP51168 640 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ADPRHP54922 357 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 AP1B1Q10567 949 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ZNF235Q14590 738 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 TTC31Q49AM3 519 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 TEX44Q53QW1 395 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 SPDYCQ5MJ68 293 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 SLC36A4Q6YBV0 504 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ERN2Q76MJ5 926 aaKnown RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 TMEFF1Q8IYR6 380 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 RYBPQ8N488 228 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 DEFB119Q8N690 84 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 SLC35B2Q8TB61 432 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 HCAR2Q8TDS4 363 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 TFB1MQ8WVM0 346 aaKnown RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 TADA1Q96BN2 335 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 QKIQ96PU8 341 aaKnown RBP eCLIP13.9□□□□□ -0.18
VRK3-219ENST00000600137 TUBGCP5Q96RT8 1024 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 WDR24Q96S15 920 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 OMDQ99983 421 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 ORAI3Q9BRQ5 295 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 GPR174Q9BXC1 333 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 CEP41Q9BYV8 373 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 C6orf106Q9H6K1 298 aaPredicted RBP13.9□□□□□ -0.18
VRK3-219ENST00000600137 EBF2Q9HAK2 575 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 SGK2Q9HBY8 427 aa13.9□□□□□ -0.18
VRK3-219ENST00000600137 LAMA1P25391 3075 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 GOLGA6L9A6NEM1 432 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 METTL12A8MUP2 240 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 AREL1O15033 823 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 SLC7A4O43246 635 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 FZD6O60353 706 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 PRLP01236 227 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 RBP3P10745 1247 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 CETN2P41208 172 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 ABL2P42684 1182 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 AP1S1P61966 158 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 DSC2Q02487 901 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 RAD51Q06609 339 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 TRAF2Q12933 501 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 LPAL2Q16609 132 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 SLC45A4Q5BKX6 768 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 RALGPS1Q5JS13 557 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 CEP68Q76N32 757 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 PRPF39Q86UA1 669 aaKnown RBP13.89□□□□□ -0.19
VRK3-219ENST00000600137 C11orf74Q86VG3 221 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 RASGEF1CQ8N431 466 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 CADM4Q8NFZ8 388 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 C1orf216Q8TAB5 229 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms