RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ZNF805Q5CZA5 627 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 PIGKQ92643 395 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 MGME1Q9BQP7 344 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 KDM4CQ9H3R0 1056 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 CAPN10Q9HC96 672 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 VPS45Q9NRW7 570 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 SEPT3Q9UH03 358 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 KNL1Q8NG31 2342 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 SPEGQ15772 3267 aa19.76■□□□□ 0.75
SHKBP1-221ENST00000599833 TRPM6Q9BX84 2022 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 TTC24A2A3L6 582 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 APOL1O14791 398 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 UGT2B4P06133 528 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 ADRB3P13945 408 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 PECAM1P16284 738 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 CCNCP24863 283 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 HOXD12P35452 270 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 LLGL1Q15334 1064 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 PPP2R5EQ16537 467 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 GDPD4Q6W3E5 623 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 PRR23CQ6ZRP0 262 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 RNF10Q8N5U6 811 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 OR14C36Q8NHC7 312 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 GANCQ8TET4 914 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 ECHDC3Q96DC8 303 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 KLHL32Q96NJ5 620 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 OSBPL1AQ9BXW6 950 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 PACSIN2Q9UNF0 486 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 FADS3Q9Y5Q0 445 aa19.75■□□□□ 0.75
SHKBP1-221ENST00000599833 C16orf96A6NNT2 1141 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 TRAFD1O14545 582 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 MATN3O15232 486 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 ZRANB2O95218 330 aaKnown RBP eCLIP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 PTPN7P35236 360 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 CCR5P51681 352 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 BNC1Q01954 994 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 PPIDQ08752 370 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 SFSWAPQ12872 951 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 IFI16Q16666 785 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 TFDP3Q5H9I0 405 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 FAM182AQ5T1J6 154 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 ZFYVE27Q5T4F4 411 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 ALG1LQ6GMV1 187 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 AADACL2Q6P093 401 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 SLC23A3Q6PIS1 610 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 SRLQ86TD4 932 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 RFX6Q8HWS3 928 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 KIAA2013Q8IYS2 634 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 RCOR2Q8IZ40 523 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 RYBPQ8N488 228 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 HES6Q96HZ4 224 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 LGMNQ99538 433 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 CINPQ9BW66 212 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 SAE1Q9UBE0 346 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 DKK3Q9UBP4 350 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 EIF2B4Q9UI10 523 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 GGT7Q9UJ14 662 aa19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 ZFR2Q9UPR6 939 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-221ENST00000599833 LNP1A1A4G5 178 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 FAM47DPA6NHR8 397 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 WNT9AO14904 365 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 AREL1O15033 823 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 AP1G1O43747 822 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 FTCDO95954 541 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 PYGMP11217 842 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 TIMP2P16035 220 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 NEK3P51956 506 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 NAP1L1P55209 391 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 HNRNPDQ14103 355 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 TRIM69Q86WT6 500 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 TXLNBQ8N3L3 684 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 CNTD1Q8N815 330 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 SPOCK2Q92563 424 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 HINFPQ9BQA5 517 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 PREBQ9HCU5 417 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 FSCN3Q9NQT6 498 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 HEY1Q9Y5J3 304 aa19.73■□□□□ 0.75
SHKBP1-221ENST00000599833 A0A1W2PPC4 97 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 LRRC72A6NJI9 287 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 MEI4A8MW99 385 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 GDF9O60383 454 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 CST8O60676 142 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 FSBPO95073 299 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 ZFXP17010 805 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 ITIH2P19823 946 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 MX2P20592 715 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 CD27P26842 260 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 MMP13P45452 471 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 MAXP61244 160 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 DYNLT1P63172 113 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 IRX4P78413 519 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 ZBTB17Q13105 803 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 FGL2Q14314 439 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 TMEM259Q4ZIN3 620 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 WDR45BQ5MNZ6 344 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 BBS12Q6ZW61 710 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 CAMK1DQ8IU85 385 aa19.72■□□□□ 0.75
SHKBP1-221ENST00000599833 ZCCHC9Q8N567 271 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms