RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 TK2O00142 265 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 MPOP05164 745 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 SBK3P0C264 359 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 ATXN1LP0C7T5 689 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 CORO1AP31146 461 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 MAPKAPK2P49137 400 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 SERPINH1P50454 418 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 ARSDP51689 593 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 YBEYP58557 167 aaPredicted RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 ZBTB16Q05516 673 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 PTPRCAPQ14761 206 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 C5orf22Q49AR2 442 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 SNX30Q5VWJ9 437 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 SLC39A11Q8N1S5 342 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 OR13J1Q8NGT2 312 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 KCTD4Q8WVF5 259 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 ZNF689Q96CS4 500 aaPredicted RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 MRM3Q9HC36 420 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 KCNK4Q9NYG8 393 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 DONSONQ9NYP3 566 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 FCHO1O14526 889 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 TSPAN3O60637 253 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 PARNO95453 639 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 SERPINE1P05121 402 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 RALBP11234 206 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 RGRP47804 291 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 GLRBP48167 497 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 HARS2P49590 506 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 KPNA1P52294 538 aaPredicted RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 DSG1Q02413 1049 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 TNK2Q07912 1038 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 TSTD2Q5T7W7 516 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 KIAA0930Q6ICG6 404 aaPredicted RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 CNSTQ6PJW8 725 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 MAVSQ7Z434 540 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 LDB1Q86U70 411 aaPredicted RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 CENPLQ8N0S6 344 aaPredicted RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 OR6Y1Q8NGX8 325 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 PTCD2Q8WV60 388 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 PPP1R2P1Q96PQ5 205 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 SLC22A12Q96S37 553 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 CYP2S1Q96SQ9 504 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 CRISPLD2Q9H0B8 497 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 LRMDAQ9H2I8 198 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 RC3H2Q9HBD1 1191 aaKnown RBP14.62□□□□□ -0.07
VRK3-217ENST00000599538 VPS45Q9NRW7 570 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 PNPOQ9NVS9 261 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 SMPD4Q9NXE4 827 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 FBXO5Q9UKT4 447 aa14.62□□□□□ -0.07
VRK3-217ENST00000599538 LOC285095A0A1B0GVY8 99 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 OR51F1A6NGY5 319 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 PIRTP0C851 137 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 CSF2RAP15509 400 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 GNA12Q03113 381 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 DLG1Q12959 904 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 THOC5Q13769 683 aaKnown RBP14.61□□□□□ -0.07
VRK3-217ENST00000599538 CCDC153Q494R4 210 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 RBM20Q5T481 1227 aaKnown RBP14.61□□□□□ -0.07
VRK3-217ENST00000599538 NEPROQ6NW34 567 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 TMEM150AQ86TG1 271 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 C2CD4AQ8NCU7 369 aaPredicted RBP14.61□□□□□ -0.07
VRK3-217ENST00000599538 NSMCE1Q8WV22 266 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 TMEM169Q96HH4 297 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 SPON2Q9BUD6 331 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 NMRAL1Q9HBL8 299 aa14.61□□□□□ -0.07
VRK3-217ENST00000599538 FAM95CA0A1B0GW59 222 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 HEATR9A2RTY3 570 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 SIN3BO75182 1162 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 ATP6V1G2O95670 118 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 SPATA31D3P0C874 917 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 SLC11A2P49281 568 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 TAS2R39P59534 338 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 TWF1Q12792 350 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 GALNT3Q14435 633 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 DBN1Q16643 649 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 IL31Q6EBC2 164 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 SPATA31D4Q6ZUB0 917 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 C16orf59Q7L2K0 433 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 PTAR1Q7Z6K3 402 aaPredicted RBP14.6□□□□□ -0.07
VRK3-217ENST00000599538 TREML1Q86YW5 311 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 RNF135Q8IUD6 432 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 PDZD8Q8NEN9 1154 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 PIWIL2Q8TC59 973 aaKnown RBP14.6□□□□□ -0.07
VRK3-217ENST00000599538 PTCD3Q96EY7 689 aaKnown RBP14.6□□□□□ -0.07
VRK3-217ENST00000599538 EXOC2Q96KP1 924 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 MYRFLQ96LU7 910 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 ZNF558Q96NG5 402 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 NDNQ99608 321 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 MIPEPQ99797 713 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 TBC1D10AQ9BXI6 508 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 TASP1Q9H6P5 420 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 CD248Q9HCU0 757 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 NSMCE4AQ9NXX6 385 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 TRPM5Q9NZQ8 1165 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 BAIAP2L1Q9UHR4 511 aa14.6□□□□□ -0.07
VRK3-217ENST00000599538 AGO1Q9UL18 857 aaKnown RBP14.6□□□□□ -0.07
VRK3-217ENST00000599538 MTF2Q9Y483 593 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms