RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 POLR2FP61218 127 aaKnown RBP17.72■□□□□ 0.43
HOMER3-210ENST00000599097 ELP6Q0PNE2 266 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 INO80DQ53TQ3 878 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-210ENST00000599097 C2CD6Q53TS8 623 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 NLRP14Q86W24 1093 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 ATL2Q8NHH9 583 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 IFI44Q8TCB0 444 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 CXorf40AQ8TE69 158 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 FAM172AQ8WUF8 416 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 SCG3Q8WXD2 468 aaKnown RBP17.72■□□□□ 0.43
HOMER3-210ENST00000599097 CCDC97Q96F63 343 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-210ENST00000599097 BMFQ96LC9 184 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 GANQ9H2C0 597 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 CATSPERBQ9H7T0 1116 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 FAM207AQ9NSI2 230 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-210ENST00000599097 SAMSN1Q9NSI8 373 aaKnown RBP17.72■□□□□ 0.43
HOMER3-210ENST00000599097 TAB2Q9NYJ8 693 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 ADAM22Q9P0K1 906 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 DNAI1Q9UI46 699 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 MYLKQ15746 1914 aa17.72■□□□□ 0.43
HOMER3-210ENST00000599097 POM121BA6NF01 834 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 IGLON5A6NGN9 336 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 BUB1O43683 1085 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 KDELR3O43731 214 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 USP12O75317 370 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 CSO75390 466 aaKnown RBP17.71■□□□□ 0.43
HOMER3-210ENST00000599097 TM7SF2O76062 418 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 LRIG2O94898 1065 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 UGT2B4P06133 528 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 GPD1P21695 349 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 ITPKBP27987 946 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 MLLT3P42568 568 aaPredicted RBP17.71■□□□□ 0.43
HOMER3-210ENST00000599097 TMPRSS3P57727 454 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 GABREP78334 506 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 FMO1Q01740 532 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 NR0B2Q15466 257 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 MYLK3Q32MK0 819 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 PARP15Q460N3 678 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 CCDC14Q49A88 953 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 TRNP1Q6NT89 227 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 GDPD4Q6W3E5 623 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 SLFN11Q7Z7L1 901 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 C3orf20Q8ND61 904 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 CENPIQ92674 756 aaPredicted RBP17.71■□□□□ 0.43
HOMER3-210ENST00000599097 PCMTD1Q96MG8 357 aaPredicted RBP17.71■□□□□ 0.43
HOMER3-210ENST00000599097 NCAPGQ9BPX3 1015 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 DKK3Q9UBP4 350 aa17.71■□□□□ 0.43
HOMER3-210ENST00000599097 APOBEC3BQ9UH17 382 aaKnown RBP17.71■□□□□ 0.43
HOMER3-210ENST00000599097 DOCK9Q9BZ29 2069 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 FGF10O15520 208 aaPredicted RBP17.7■□□□□ 0.42
HOMER3-210ENST00000599097 EPHB2P29323 1055 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 RBMS1P29558 406 aaKnown RBP17.7■□□□□ 0.42
HOMER3-210ENST00000599097 ACVRL1P37023 503 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 PFN3P60673 137 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 RHOAP61586 193 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 TLE3Q04726 772 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 CCDC173Q0VFZ6 552 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 C15orf59Q2T9L4 293 aaPredicted RBP17.7■□□□□ 0.42
HOMER3-210ENST00000599097 CFAP58Q5T655 872 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 ESRP1Q6NXG1 681 aaKnown RBP17.7■□□□□ 0.42
HOMER3-210ENST00000599097 IGF2-ASQ6U949 168 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 MACC1Q6ZN28 852 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 TTC7BQ86TV6 843 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 SDR16C5Q8N3Y7 309 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 FSTL5Q8N475 847 aaPredicted RBP17.7■□□□□ 0.42
HOMER3-210ENST00000599097 RTL3Q8N8U3 475 aaKnown RBP17.7■□□□□ 0.42
HOMER3-210ENST00000599097 NEK11Q8NG66 645 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 HCAR2Q8TDS4 363 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 LMX1AQ8TE12 382 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 SLC20A1Q8WUM9 679 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 SLC39A7Q92504 469 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 KLHL32Q96NJ5 620 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 DPH1Q9BZG8 443 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 TTYH3Q9C0H2 523 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 MFHAS1Q9Y4C4 1052 aa17.7■□□□□ 0.42
HOMER3-210ENST00000599097 PTPRQQ9UMZ3 2332 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 EIF3CLB5ME19 914 aaKnown RBP17.69■□□□□ 0.42
HOMER3-210ENST00000599097 TMCC1O94876 653 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 ANXA6P08133 673 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 GIMD1P0DJR0 217 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 HTR1BP28222 390 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 JAM2P57087 298 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 C1QBPQ07021 282 aaKnown RBP17.69■□□□□ 0.42
HOMER3-210ENST00000599097 FGL2Q14314 439 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 KRT31Q15323 416 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 ZNF542PQ5EBM4 170 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 CDKAL1Q5VV42 579 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 DNAJC24Q6P3W2 148 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 RBM44Q6ZP01 1051 aaKnown RBP17.69■□□□□ 0.42
HOMER3-210ENST00000599097 PHF13Q86YI8 300 aaPredicted RBP17.69■□□□□ 0.42
HOMER3-210ENST00000599097 SPACA3Q8IXA5 215 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 OR6K2Q8NGY2 324 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 SLC30A5Q8TAD4 765 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 GPT2Q8TD30 523 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 KLF6Q99612 283 aaPredicted RBP17.69■□□□□ 0.42
HOMER3-210ENST00000599097 EIF3CQ99613 913 aaKnown RBP17.69■□□□□ 0.42
HOMER3-210ENST00000599097 VPS16Q9H269 839 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 NLRC4Q9NPP4 1024 aa17.69■□□□□ 0.42
HOMER3-210ENST00000599097 SEPT11Q9NVA2 429 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms