RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 KLK6Q92876 244 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 GLMNQ92990 594 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 GDAP1L1Q96MZ0 367 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 EPAS1Q99814 870 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 MYOCQ99972 504 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 C11orf70Q9BRQ4 267 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 CPEB1Q9BZB8 566 aaKnown RBP13.82□□□□□ -0.2
TRIM28-211ENST00000597968 TTYH3Q9C0H2 523 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 VPS16Q9H269 839 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 PRORYQ9H606 182 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 CATSPERBQ9H7T0 1116 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 FZD3Q9NPG1 666 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-211ENST00000597968 UCKL1Q9NWZ5 548 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 TAB2Q9NYJ8 693 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 NEU3Q9UQ49 428 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
TRIM28-211ENST00000597968 GOLGA4Q13439 2230 aaKnown RBP13.82□□□□□ -0.2
TRIM28-211ENST00000597968 TEX51A0A1B0GUA7 166 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 CAPN8A6NHC0 703 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 RNF103O00237 685 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 FGF10O15520 208 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-211ENST00000597968 AQP9O43315 295 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 BRINP1O60477 761 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 TCEA3O75764 348 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 IGSF6O95976 241 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-211ENST00000597968 ACVRL1P37023 503 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 MLLT3P42568 568 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-211ENST00000597968 RPIAP49247 311 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 PEX5P50542 639 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 BLKP51451 505 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 ZNF143P52747 638 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-211ENST00000597968 UCNP55089 124 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 FGL2Q14314 439 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 CLEC16AQ2KHT3 1053 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 EFHC2Q5JST6 749 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 GDPD4Q6W3E5 623 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 RYBPQ8N488 228 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-211ENST00000597968 ZNF248Q8NDW4 579 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 NEK11Q8NG66 645 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 SLC20A1Q8WUM9 679 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 CENPTQ96BT3 561 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 VCPIP1Q96JH7 1222 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 ERGIC2Q96RQ1 377 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 TM6SF2Q9BZW4 377 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 ABCG4Q9H172 646 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 NDFIP2Q9NV92 336 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 SPASTQ9UBP0 616 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 DNAI1Q9UI46 699 aa13.81□□□□□ -0.2
TRIM28-211ENST00000597968 ARID1BQ8NFD5 2236 aaPredicted RBP13.8□□□□□ -0.2
TRIM28-211ENST00000597968 EME2A4GXA9 379 aaPredicted RBP13.8□□□□□ -0.2
TRIM28-211ENST00000597968 IGLON5A6NGN9 336 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 TMEM110-MUSTN1A8MSY1 372 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 FAM72CH0Y354 149 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 KRIT1O00522 736 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 FFAR2O15552 330 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 TLX3O43711 291 aaPredicted RBP13.8□□□□□ -0.2
TRIM28-211ENST00000597968 TM7SF2O76062 418 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 JUNDP17535 347 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 EPHB2P29323 1055 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 LSSP48449 732 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 KLK7P49862 253 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 THOP1P52888 689 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 ELP6Q0PNE2 266 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 PDE1CQ14123 709 aaPredicted RBP13.8□□□□□ -0.2
TRIM28-211ENST00000597968 AGERQ15109 404 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 FAM72AQ5TYM5 149 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 FAM72DQ6L9T8 149 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 MON1BQ7L1V2 547 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 TTC7BQ86TV6 843 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 FAM72BQ86X60 149 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 JOSD2Q8TAC2 188 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 NAT6Q93015 286 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 VOPP1Q96AW1 172 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 IL12RB2Q99665 862 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 NLRC4Q9NPP4 1024 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 ANO10Q9NW15 660 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
TRIM28-211ENST00000597968 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 CHD5Q8TDI0 1954 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 BPTFQ12830 3046 aa13.8□□□□□ -0.2
TRIM28-211ENST00000597968 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 TCRBV5S1A1TA0A578 114 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 CFAP69A5D8W1 941 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 LGALS16A8MUM7 142 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 LMO7DNF2Z398 122 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 RAD51BO15315 384 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 BUB1O43683 1085 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 TMCC1O94876 653 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 UGT2B4P06133 528 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 ABL2P42684 1182 aa13.79□□□□□ -0.2
TRIM28-211ENST00000597968 ZNF135P52742 658 aaPredicted RBP13.79□□□□□ -0.2
TRIM28-211ENST00000597968 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
TRIM28-211ENST00000597968 PCBP4P57723 403 aaKnown RBP13.79□□□□□ -0.2
TRIM28-211ENST00000597968 MYL5Q02045 173 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms