RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 FEZ2Q9UHY8 353 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-207ENST00000597136 TMEM131Q92545 1883 aa15.21■□□□□ 0.03
TRIM28-207ENST00000597136 IGHV1OR15-9A0A0B4J2B8 117 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 MID1O15344 667 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 ZBTB24O43167 697 aaPredicted RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 IL1BP01584 269 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 C7P10643 843 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 STIP1P31948 543 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 SLC8A1P32418 973 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 NBL1P41271 181 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 RGRP47804 291 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 PSMD8P48556 350 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 TPMTP51580 245 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 LMNB2Q03252 620 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 SLC10A7Q0GE19 358 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 ELAVL3Q14576 367 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 CST6Q15828 149 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 USP39Q53GS9 565 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 INO80DQ53TQ3 878 aaPredicted RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 CARD16Q5EG05 197 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 ARSIQ5FYB1 569 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 ZNF776Q68DI1 518 aaPredicted RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 FAM124AQ86V42 546 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 KBTBD6Q86V97 674 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 DEFB119Q8N690 84 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 PCDH20Q8N6Y1 951 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 FAM71DQ8N9W8 422 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 TSEN2Q8NCE0 465 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 SLCO2A1Q92959 643 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 ISG20Q96AZ6 181 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 EXOC2Q96KP1 924 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 CCDC114Q96M63 670 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 CEP44Q9C0F1 390 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 SP110Q9HB58 689 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 USP36Q9P275 1121 aaKnown RBP15.2■□□□□ 0.02
TRIM28-207ENST00000597136 SERGEFQ9UGK8 458 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 PPM1HQ9ULR3 514 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 CABIN1Q9Y6J0 2220 aa15.2■□□□□ 0.02
TRIM28-207ENST00000597136 CXorf51AA0A1B0GTR3 108 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 TTC24A2A3L6 582 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 CFAP69A5D8W1 941 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 MUSKO15146 869 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 INSIG1O15503 277 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 KCNN4O15554 427 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GJB3O75712 270 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 PTGIRP43119 386 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 CCNHP51946 323 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GEMIN4P57678 1058 aaKnown RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 DR1Q01658 176 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 METTL3Q86U44 580 aaKnown RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 CCDC13Q8IYE1 715 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 AADATQ8N5Z0 425 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 PIP4K2CQ8TBX8 421 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GRK7Q8WTQ7 553 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 HTR3CQ8WXA8 447 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 OR8D1Q8WZ84 308 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 FATE1Q969F0 183 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 ZNF419Q96HQ0 510 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 NSMCE3Q96MG7 304 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 IRF2BPLQ9H1B7 796 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 DUSP15Q9H1R2 295 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 HECAQ9UBI9 543 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 WASF2Q9Y6W5 498 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 KCNK1O00180 336 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 MATN3O15232 486 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 MTSS1O43312 755 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 RAD51CO43502 376 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 RNASEH1O60930 286 aaKnown RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 ZNF189O75820 626 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 ECEL1O95672 775 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 DNTTP04053 509 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 ACADMP11310 421 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 DRD3P35462 400 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GDF10P55107 478 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 RHOAP61586 193 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 DHX34Q14147 1143 aaKnown RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 SIM2Q14190 667 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 TIGD7Q6NT04 549 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 PRR23BQ6ZRT6 265 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 CEP68Q76N32 757 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 RYBPQ8N488 228 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 SUMF1Q8NBK3 374 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 OR2AP1Q8NGE2 309 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GRIN3AQ8TCU5 1115 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 RTP4Q96DX8 246 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 FERMT1Q9BQL6 677 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 PABPC3Q9H361 631 aaKnown RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 FBRSQ9HAH7 460 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 FBXL12Q9NXK8 326 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 SEPT10Q9P0V9 454 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 EVLQ9UI08 416 aaPredicted RBP15.19■□□□□ 0.02
TRIM28-207ENST00000597136 NEU2Q9Y3R4 380 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 GVINP1Q7Z2Y8 2422 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 PIEZO1Q92508 2521 aa15.19■□□□□ 0.02
TRIM28-207ENST00000597136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 A0A1W2PP55 124 aa15.18■□□□□ 0.02
TRIM28-207ENST00000597136 TTI1O43156 1089 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms