RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 THSD1Q9NS62 852 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 GPR27Q9NS67 375 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 NDFIP2Q9NV92 336 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 NCKIPSDQ9NZQ3 722 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 SPASTQ9UBP0 616 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 OR12D3Q9UGF7 316 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 GGT7Q9UJ14 662 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 ITM2BQ9Y287 266 aa10.73□□□□□ -0.69
CHMP2A-202ENST00000596708 CAPN8A6NHC0 703 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 TPP1O14773 563 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 MUSKO15146 869 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 TM7SF2O76062 418 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 POP4O95707 220 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 GSRP00390 522 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 UGT2B4P06133 528 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ANXA6P08133 673 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 PLA2G2AP14555 144 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 UCHL3P15374 230 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 SDC4P31431 198 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ADRA1BP35368 520 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 MAPKAPK2P49137 400 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RPIAP49247 311 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ADKP55263 362 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 NOMO3P69849 1222 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RAD51Q06609 339 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 C15orf59Q2T9L4 293 aaPredicted RBP10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 MYLK3Q32MK0 819 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RAB6CQ53S08 254 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 PRRT3Q5FWE3 981 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ARTNQ5T4W7 220 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 FAXCQ5TGI0 409 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RBM44Q6ZP01 1051 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ARCQ7LC44 396 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 VPS36Q86VN1 386 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RBFAQ8N0V3 343 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 DENND6BQ8NEG7 585 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 OR2AP1Q8NGE2 309 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 CXorf40AQ8TE69 158 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RXFP2Q8WXD0 754 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ASB12Q8WXK4 309 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 STK33Q9BYT3 514 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 DPH1Q9BZG8 443 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 SLC13A1Q9BZW2 595 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 RAB6CQ9H0N0 254 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 MAGEH1Q9H213 219 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 TCEAL2Q9H3H9 227 aaPredicted RBP10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 SYNDIG1Q9H7V2 258 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 WDR70Q9NW82 654 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 APOBEC3BQ9UH17 382 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 DOLKQ9UPQ8 538 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 ENTPD2Q9Y5L3 495 aa10.72□□□□□ -0.69
CHMP2A-202ENST00000596708 CXorf51AA0A1B0GTR3 108 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 BUB1O43683 1085 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 MMP20O60882 483 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 RAMP2O60895 175 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 RHOQP17081 205 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 XPAP23025 273 aaPredicted RBP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 PFN3P60673 137 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 YPEL5P62699 121 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 NRG1Q02297 640 aaPredicted RBP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 CCDC14Q49A88 953 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 LRRC73Q5JTD7 316 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 PERM1Q5SV97 790 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 ATXN7L2Q5T6C5 722 aaPredicted RBP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 ESRP1Q6NXG1 681 aaKnown RBP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 PCSK4Q6UW60 755 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 GDPD4Q6W3E5 623 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 ZNF677Q86XU0 584 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 PHACTR4Q8IZ21 702 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 CENPTQ96BT3 561 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 GRAMD1AQ96CP6 724 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 TBC1D31Q96DN5 1066 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 SLC46A1Q96NT5 459 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 C11orf70Q9BRQ4 267 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 C1QTNF7Q9BXJ2 289 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 NAA15Q9BXJ9 866 aaKnown RBP10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 OSBPL1AQ9BXW6 950 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 MAGEB5Q9BZ81 275 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 RETREG1Q9H6L5 497 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 ASCL3Q9NQ33 180 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 TMEM248Q9NWD8 314 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
CHMP2A-202ENST00000596708 ZFC3H1O60293 1989 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 F8VZ95 297 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 FAM72CH0Y354 149 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 KDELR3O43731 214 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 GCATO75600 419 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 TCEA3O75764 348 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 GFPT2O94808 682 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 LRIG2O94898 1065 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 GJB6O95452 261 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 IGSF6O95976 241 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 PLEKP08567 350 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 CTSEP14091 401 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 ITIH2P19823 946 aa10.7□□□□□ -0.7
CHMP2A-202ENST00000596708 IGFALSP35858 605 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms