RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 MAT2AP31153 395 aaKnown RBP11.3□□□□□ -0.6
VRK3-210ENST00000596121 SLC1A1P43005 524 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 VAV2P52735 878 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 GALNT2Q10471 571 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 IHHQ14623 411 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 LBRQ14739 615 aaKnown RBP11.3□□□□□ -0.6
VRK3-210ENST00000596121 TAZQ16635 292 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 ZNF805Q5CZA5 627 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 LRRC73Q5JTD7 316 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 MFSD7Q6UXD7 560 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 GDPD4Q6W3E5 623 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 RHOT1Q8IXI2 618 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 PLD5Q8N7P1 536 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 CEP76Q8TAP6 659 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 KRT35Q92764 455 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 KLK6Q92876 244 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
VRK3-210ENST00000596121 SLC6A18Q96N87 628 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 SP110Q9HB58 689 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 ITM2BQ9Y287 266 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 CA5BQ9Y2D0 317 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 FADS3Q9Y5Q0 445 aa11.3□□□□□ -0.6
VRK3-210ENST00000596121 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
VRK3-210ENST00000596121 A0A1W2PQU0 124 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 A0A1W2PR77 199 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 BTNL10A8MVZ5 291 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 KCNK3O14649 394 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 SPOPO43791 374 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 IGSF6O95976 241 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 KRT1P04264 644 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 CR2P20023 1033 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 DPP6P42658 865 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 MAPK8P45983 427 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 ID4P47928 161 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 CSNK1DP48730 415 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 NEK3P51956 506 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 LIMK1P53667 647 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 GRIK2Q13002 908 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 FGL2Q14314 439 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 LLGL1Q15334 1064 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 KIF19Q2TAC6 998 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 ZNF284Q2VY69 593 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 SLC9A4Q6AI14 798 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 C11orf63Q6NUN7 778 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 NPNTQ6UXI9 565 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 SRLQ86TD4 932 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 TRIM69Q86WT6 500 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 CAMK1DQ8IU85 385 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 LRRC57Q8N9N7 239 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 LRIG1Q96JA1 1093 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 ZNF599Q96NL3 588 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 PSKH2Q96QS6 385 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 HERPUD2Q9BSE4 406 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 NUSAP1Q9BXS6 441 aaKnown RBP11.29□□□□□ -0.6
VRK3-210ENST00000596121 CPEB1Q9BZB8 566 aaKnown RBP11.29□□□□□ -0.6
VRK3-210ENST00000596121 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 CAAP1Q9H8G2 361 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 DTLQ9NZJ0 730 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 PLXNA2O75051 1894 aa11.29□□□□□ -0.6
VRK3-210ENST00000596121 CACNA1AO00555 2505 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 DCDC2BA2VCK2 349 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 ZNF487B1APH4 448 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 AREL1O15033 823 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
VRK3-210ENST00000596121 PRKCGP05129 697 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 KRT10P13645 584 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 GNSP15586 552 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 PRLRP16471 622 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 GARSP41250 739 aaKnown RBP11.28□□□□□ -0.6
VRK3-210ENST00000596121 CDKN2BP42772 138 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 SEMG2Q02383 582 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 NSUN2Q08J23 767 aaKnown RBP eCLIP11.28□□□□□ -0.6
VRK3-210ENST00000596121 RFTN1Q14699 578 aaPredicted RBP11.28□□□□□ -0.6
VRK3-210ENST00000596121 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 PRAMEF14Q5SWL7 426 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 KDM7AQ6ZMT4 941 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 HORMAD1Q86X24 394 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 ATPAF2Q8N5M1 289 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 TEX26Q8N6G2 289 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 MAML1Q92585 1016 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 PPP1R16AQ96I34 528 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 TSGA13Q96PP4 275 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 GTPBP2Q9BX10 602 aaKnown RBP11.28□□□□□ -0.6
VRK3-210ENST00000596121 OSBPL1AQ9BXW6 950 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 PREBQ9HCU5 417 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 SAE1Q9UBE0 346 aaPredicted RBP11.28□□□□□ -0.6
VRK3-210ENST00000596121 DKK3Q9UBP4 350 aa11.28□□□□□ -0.6
VRK3-210ENST00000596121 SUSD2Q9UGT4 822 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms