RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SERPINF2P08697 491 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 EIF4HQ15056 248 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 PTPRNQ16849 979 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 NAIF1Q69YI7 327 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 C22orf39Q6P5X5 142 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 HDXQ7Z353 690 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 IGDCC3Q8IVU1 814 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 TERB1Q8NA31 727 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 ATP11CQ8NB49 1132 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 IPMKQ8NFU5 416 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 TTC8Q8TAM2 541 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 VOPP1Q96AW1 172 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 RPL10LQ96L21 214 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 C9orf72Q96LT7 481 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 TRIB3Q96RU7 358 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 PABPC3Q9H361 631 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 VIPAS39Q9H9C1 493 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 SCUBE2Q9NQ36 999 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 SLCO3A1Q9UIG8 710 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 AP3B1O00203 1094 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 RIPK2O43353 540 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 TTC4O95801 387 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 EPOP01588 193 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 DLDP09622 509 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 ATXN1LP0C7T5 689 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 TSHRP16473 764 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 ELK3P41970 407 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 NPY2RP49146 381 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 SCNN1BP51168 640 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 AP1S1P61966 158 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 KDSRQ06136 332 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 CDH17Q12864 832 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 KYNUQ16719 465 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 PUS10Q3MIT2 529 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 CCDC38Q502W7 563 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 ATXN7L2Q5T6C5 722 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 PTCRAQ6ISU1 281 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 PLPP6Q8IY26 295 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 ZBED8Q8IZ13 594 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 IQCKQ8N0W5 287 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 SLC44A3Q8N4M1 653 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 PCDH20Q8N6Y1 951 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 KDM1BQ8NB78 822 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 FRS2Q8WU20 508 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 FEM1CQ96JP0 617 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 EXOC2Q96KP1 924 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 EBNA1BP2Q99848 306 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 APOL2Q9BQE5 337 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 KCNK12Q9HB15 430 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 ELOVL2Q9NXB9 296 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 LIMD1Q9UGP4 676 aa14.91□□□□□ -0.02
SHKBP1-211ENST00000595945 SDR42E2A6NKP2 422 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 TIMM44O43615 452 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 IGSF6O95976 241 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 PRLP01236 227 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 ATP5BP06576 529 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 ABHD2P08910 425 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 MGAT1P26572 445 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 MAPK8P45983 427 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 SESN2P58004 480 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 GPX6P59796 221 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 CDK18Q07002 472 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 MSLNQ13421 630 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 MTM1Q13496 603 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 DLG2Q15700 870 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 ANKMY2Q8IV38 441 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 MPP5Q8N3R9 675 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 OR2AP1Q8NGE2 309 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 CYB5D2Q8WUJ1 264 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 UBLCP1Q8WVY7 318 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 DNASE1L2Q92874 299 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 TTC25Q96NG3 672 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 TDRD1Q9BXT4 1180 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 TM6SF2Q9BZW4 377 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 PLAC1Q9HBJ0 212 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 LRRC4CQ9HCJ2 640 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 PIH1D1Q9NWS0 290 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 HCN2Q9UL51 889 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 CHMP2BQ9UQN3 213 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 NFS1Q9Y697 457 aa14.9□□□□□ -0.02
SHKBP1-211ENST00000595945 SCN8AQ9UQD0 1980 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 WASH3PC4AMC7 463 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 FZD6O60353 706 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 KAT7O95251 611 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 NUDT17P0C025 328 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 GRIA2P42262 883 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 CHRNA4P43681 627 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 SOX9P48436 509 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 SNRPD1P62314 119 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 TRAF2Q12933 501 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 SLC1A5Q15758 541 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 PCSK7Q16549 785 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 PREPLQ4J6C6 727 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 CARD16Q5EG05 197 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms