RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 JADE3Q92613 823 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CDKL2Q92772 493 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 MRPS26Q9BYN8 205 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 COL4A4P53420 1690 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 C15orf38-AP3S2A0A0A6YYH1 394 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 E9PAM4 449 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 KLF11O14901 512 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 SUPT3HO75486 399 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 TOP3BO95985 862 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 COL6A1P12109 1028 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 VARSP26640 1264 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CCL23P55773 120 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 DLG1Q12959 904 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CCDC92Q53HC0 331 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 KCTD11Q693B1 232 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 ARPINQ7Z6K5 226 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 MIB1Q86YT6 1006 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 NDUFAF2Q8N183 169 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CNTD1Q8N815 330 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 ZSCAN18Q8TBC5 510 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 FCRL3Q96P31 734 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 VAT1Q99536 393 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CRISPLD1Q9H336 500 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 ELAC1Q9H777 363 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 CATSPERBQ9H7T0 1116 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 BFARQ9NZS9 450 aa17.29■□□□□ 0.36
SHKBP1-205ENST00000594973 TBKBP1A7MCY6 615 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 KCNU1A8MYU2 1149 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 CASQ2O14958 399 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 DENRO43583 198 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 PGM3O95394 542 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 ENO1P06733 434 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 F7P08709 466 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 CPA2P48052 419 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 ACADVLP49748 655 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 AQP4P55087 323 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 COG7P83436 770 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 NIPAL4Q0D2K0 466 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 RTP2Q5QGT7 225 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 MANEALQ5VSG8 457 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 SPATA22Q8NHS9 363 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 FBXO32Q969P5 355 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 ZNF669Q96BR6 464 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 ZNF419Q96HQ0 510 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 DEFB118Q96PH6 123 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 NAT9Q9BTE0 207 aa17.28■□□□□ 0.36
SHKBP1-205ENST00000594973 PATJQ8NI35 1801 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 E9PBE3 544 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 FGF10O15520 208 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 PORP16435 677 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 BGNP21810 368 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 SERPINB9P50453 376 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 MRPL58Q14197 206 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 PIK3R6Q5UE93 754 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 RNF19BQ6ZMZ0 732 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 CYS1Q717R9 158 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 TAS1R1Q7RTX1 841 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 TREML1Q86YW5 311 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 BBS5Q8N3I7 341 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 DDI1Q8WTU0 396 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 DPF3Q92784 378 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 MECRQ9BV79 373 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 OXCT2Q9BYC2 517 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 DDX18Q9NVP1 670 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 ARMCX1Q9P291 453 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 VWA8A3KMH1 1905 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 MYO16Q9Y6X6 1858 aa17.27■□□□□ 0.36
SHKBP1-205ENST00000594973 CCDC78A2IDD5 438 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 HMBSP08397 361 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF24P17028 368 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 YWHAQP27348 245 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 OXCT1P55809 520 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 TBX4P57082 545 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 RAB15P59190 212 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 SPIDRQ14159 915 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 NADK2Q4G0N4 442 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 PACS1Q6VY07 963 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 TFAP2DQ7Z6R9 452 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 CERS2Q96G23 380 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 SIKE1Q9BRV8 207 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 Q9H521 79 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 LRRC40Q9H9A6 602 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 CASS4Q9NQ75 786 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 TLR6Q9Y2C9 796 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 PLLPQ9Y342 182 aa17.27■□□□□ 0.35
SHKBP1-205ENST00000594973 OR6C75A6NL08 312 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 MAFKO60675 156 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 MT-CYBP00156 380 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 FGFR3P22607 806 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 CCNCP24863 283 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 HOXC13P31276 330 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 GJA8P48165 433 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 MLLT6P55198 1093 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 DUSP4Q13115 394 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 PRPSAP1Q14558 356 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 ARHGEF6Q15052 776 aa17.26■□□□□ 0.35
SHKBP1-205ENST00000594973 PSMD5Q16401 504 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms