RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SMAD1Q15797 465 aaKnown RBP23.81■■□□□ 1.4
LSM4-204ENST00000594828 CA9Q16790 459 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 TTC7BQ86TV6 843 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 LUZP1Q86V48 1076 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 DCP2Q8IU60 420 aaKnown RBP23.81■■□□□ 1.4
LSM4-204ENST00000594828 FNIP1Q8TF40 1166 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 ZNF653Q96CK0 615 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 ARHGEF26Q96DR7 871 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 BMFQ96LC9 184 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 MFHAS1Q9Y4C4 1052 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 IGLON5A6NGN9 336 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 EEF2KO00418 725 aaKnown RBP23.8■■□□□ 1.4
LSM4-204ENST00000594828 PRPSAP2O60256 369 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 NDST2P52849 883 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 FANCCQ00597 558 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 PTAR1Q7Z6K3 402 aaPredicted RBP23.8■■□□□ 1.4
LSM4-204ENST00000594828 MARCH9Q86YJ5 346 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 SLC25A45Q8N413 288 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 TSC1Q92574 1164 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 TRIM11Q96F44 468 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 SNRNP25Q9BV90 132 aaKnown RBP23.8■■□□□ 1.4
LSM4-204ENST00000594828 C1QTNF2Q9BXJ5 285 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 TRIM7Q9C029 511 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 LRRC19Q9H756 370 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 MYO1AQ9UBC5 1043 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 UBA2Q9UBT2 640 aaPredicted RBP23.8■■□□□ 1.4
LSM4-204ENST00000594828 GGT7Q9UJ14 662 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 SCINQ9Y6U3 715 aa23.8■■□□□ 1.4
LSM4-204ENST00000594828 SPEGQ15772 3267 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 TRPM6Q9BX84 2022 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 FAM149AA5PLN7 773 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 POM121BA6NF01 834 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 RAD51BO15315 384 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 DAPK3O43293 454 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 RFPL3O75679 317 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 MYBL1P10243 752 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 MIPP30301 263 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 ACADVLP49748 655 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 CYTH1Q15438 398 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 SLC22A18ASQ8N1D0 253 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 CELF6Q96J87 481 aaKnown RBP23.79■■□□□ 1.4
LSM4-204ENST00000594828 LENG8Q96PV6 779 aaPredicted RBP23.79■■□□□ 1.4
LSM4-204ENST00000594828 PEBP4Q96S96 227 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 ISCUQ9H1K1 167 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 CCDC86Q9H6F5 360 aaKnown RBP23.79■■□□□ 1.4
LSM4-204ENST00000594828 MRPL47Q9HD33 250 aaKnown RBP23.79■■□□□ 1.4
LSM4-204ENST00000594828 ITM2BQ9Y287 266 aa23.79■■□□□ 1.4
LSM4-204ENST00000594828 TAF4O00268 1085 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 FPGTO14772 594 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 AREL1O15033 823 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 CKMT2P17540 419 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 DGKAP23743 735 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 UBASH3AP57075 661 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 KYAT3Q6YP21 454 aaKnown RBP23.78■■□□□ 1.4
LSM4-204ENST00000594828 RFX8Q6ZV50 586 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 TMPRSS12Q86WS5 348 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 PROSER1Q86XN7 944 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 PSTKQ8IV42 348 aaKnown RBP23.78■■□□□ 1.4
LSM4-204ENST00000594828 ASB12Q8WXK4 309 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 IFT43Q96FT9 208 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 KCTD15Q96SI1 283 aaPredicted RBP23.78■■□□□ 1.4
LSM4-204ENST00000594828 KLF6Q99612 283 aaPredicted RBP23.78■■□□□ 1.4
LSM4-204ENST00000594828 NCAPGQ9BPX3 1015 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 CPEB1Q9BZB8 566 aaKnown RBP23.78■■□□□ 1.4
LSM4-204ENST00000594828 SLC39A8Q9C0K1 460 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 DKK3Q9UBP4 350 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 LHX3Q9UBR4 397 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 BZW2Q9Y6E2 419 aaKnown RBP23.78■■□□□ 1.4
LSM4-204ENST00000594828 ASPMQ8IZT6 3477 aa23.78■■□□□ 1.4
LSM4-204ENST00000594828 A0A1W2PQJ5 194 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 ARHGAP42A6NI28 874 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 J3KR12 359 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 TRIM38O00635 465 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 SPINT1O43278 529 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 RABIFP47224 123 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 PAPOLAP51003 745 aaKnown RBP23.77■■□□□ 1.4
LSM4-204ENST00000594828 ZNF211Q13398 564 aaPredicted RBP23.77■■□□□ 1.4
LSM4-204ENST00000594828 HS1BP3Q53T59 392 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 TDRD12Q587J7 1177 aaKnown RBP23.77■■□□□ 1.4
LSM4-204ENST00000594828 PPP6R3Q5H9R7 873 aaPredicted RBP23.77■■□□□ 1.4
LSM4-204ENST00000594828 EXOC2Q96KP1 924 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.77■■□□□ 1.4
LSM4-204ENST00000594828 PDFQ9HBH1 243 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 GPR27Q9NS67 375 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 UCKL1Q9NWZ5 548 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 DNAJC28Q9NX36 388 aa23.77■■□□□ 1.4
LSM4-204ENST00000594828 IPO11Q9UI26 975 aaKnown RBP23.77■■□□□ 1.4
LSM4-204ENST00000594828 GOLGA6L19H0YKK7 550 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 INSIG1O15503 277 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 SIGLEC6O43699 453 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 PRAMEF11O60813 436 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 LRCH4O75427 683 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 PIAS2O75928 621 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 TIMP2P16035 220 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 ERCC2P18074 760 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 PBX1P40424 430 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 ILKQ13418 452 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 GRM3Q14832 879 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 ZNF542PQ5EBM4 170 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 LRRC73Q5JTD7 316 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms