RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 RHOBTB1O94844 696 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 FSBPO95073 299 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 CD6P30203 668 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 CHRNA3P32297 505 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 PLA2G5P39877 138 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 FAM46CQ5VWP2 391 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 DPY19L3Q6ZPD9 716 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 ARHGAP36Q6ZRI8 547 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.91■□□□□ 0.78
LSM4-203ENST00000593829 NCKAP1Q9Y2A7 1128 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 NUP205Q92621 2012 aa19.91■□□□□ 0.78
LSM4-203ENST00000593829 C1QTNF3-AMACRE9PGA6 284 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 MFSD11O43934 449 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 GSRP00390 522 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 C5AR1P21730 350 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 SNRPD1P62314 119 aaKnown RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 LAIR1Q6GTX8 287 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 MFSD7Q6UXD7 560 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 USP30Q70CQ3 517 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 LRRC49Q8IUZ0 686 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 RCOR2Q8IZ40 523 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 ATPAF2Q8N5M1 289 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 GANCQ8TET4 914 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 TM6SF2Q9BZW4 377 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 EPN3Q9H201 632 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 WSB2Q9NYS7 404 aaPredicted RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 HMGB1P1B2RPK0 211 aaPredicted RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 NDUFAB1O14561 156 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 PALMO75781 387 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 PRNPP04156 253 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 CTNNA1P35221 906 aaKnown RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 MARCKSL1P49006 195 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 LIG3P49916 1009 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 CCNHP51946 323 aaPredicted RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 RHOAP61586 193 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 RPL6Q02878 288 aaKnown RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 CYTH1Q15438 398 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 PMS2CLQ68D20 193 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 LRIG3Q6UXM1 1119 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 LPCAT2Q7L5N7 544 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 CHST14Q8NCH0 376 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 TMIEQ8NEW7 156 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 OR2AP1Q8NGE2 309 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 PIP4K2CQ8TBX8 421 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 KRT35Q92764 455 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 TOE1Q96GM8 510 aaKnown RBP19.9■□□□□ 0.78
LSM4-203ENST00000593829 ZNF599Q96NL3 588 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 HEPHQ9BQS7 1158 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 FBXL12Q9NXK8 326 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 IL36AQ9UHA7 158 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 AMFRQ9UKV5 643 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 SARDHQ9UL12 918 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 PCDHA3Q9Y5H8 950 aa19.9■□□□□ 0.78
LSM4-203ENST00000593829 PLXND1Q9Y4D7 1925 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 PRR23AA6NEV1 266 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 NDUFS2O75306 463 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 ZFXP17010 805 aaPredicted RBP19.89■□□□□ 0.77
LSM4-203ENST00000593829 RFTN1Q14699 578 aaPredicted RBP19.89■□□□□ 0.77
LSM4-203ENST00000593829 SPDYCQ5MJ68 293 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 MEI1Q5TIA1 1274 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 SLC9A4Q6AI14 798 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 PEX26Q7Z412 305 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 NT5DC3Q86UY8 548 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 FAM124AQ86V42 546 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 RFX6Q8HWS3 928 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 RYBPQ8N488 228 aaPredicted RBP19.89■□□□□ 0.77
LSM4-203ENST00000593829 EXD1Q8NHP7 514 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 RBM41Q96IZ5 413 aaKnown RBP19.89■□□□□ 0.77
LSM4-203ENST00000593829 OMDQ99983 421 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 NYNRINQ9P2P1 1898 aaKnown RBP19.89■□□□□ 0.77
LSM4-203ENST00000593829 DMDP11532 3685 aa19.89■□□□□ 0.77
LSM4-203ENST00000593829 APOL1O14791 398 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 RNASEH2AO75792 299 aaKnown RBP19.88■□□□□ 0.77
LSM4-203ENST00000593829 HEXIM1O94992 359 aaKnown RBP19.88■□□□□ 0.77
LSM4-203ENST00000593829 CTSLP07711 333 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 CTNNA2P26232 953 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 CXCR5P32302 372 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 HSPA9P38646 679 aaKnown RBP19.88■□□□□ 0.77
LSM4-203ENST00000593829 CDKN2BP42772 138 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 FNTAP49354 379 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 CARSP49589 748 aaKnown RBP19.88■□□□□ 0.77
LSM4-203ENST00000593829 GALNT2Q10471 571 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 TAZQ16635 292 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 ARSIQ5FYB1 569 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 SPOCD1Q6ZMY3 1216 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 ASCL5Q7RTU5 278 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 LOXL4Q96JB6 756 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 A0A1W2PP55 124 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 MAFKO60675 156 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 IGSF6O95976 241 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 HNRNPH1P31943 449 aaKnown RBP19.88■□□□□ 0.77
LSM4-203ENST00000593829 LSP1P33241 339 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 GBE1Q04446 702 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 TFDP3Q5H9I0 405 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 CCDC50Q8IVM0 306 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 TMEFF1Q8IYR6 380 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 HDDC3Q8N4P3 179 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 AADATQ8N5Z0 425 aa19.88■□□□□ 0.77
LSM4-203ENST00000593829 PLD5Q8N7P1 536 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms