RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PI15O43692 258 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 RNASEH1O60930 286 aaKnown RBP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 METTL18O95568 372 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 PRNPP04156 253 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 MMP2P08253 660 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 SERPINF2P08697 491 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 GKP32189 559 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 VPS41P49754 854 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 CLCN5P51795 746 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 DGKEP52429 567 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 C8orf74Q6P047 294 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 TMEM92Q6UXU6 159 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 TAB3Q8N5C8 712 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 OR2T3Q8NH03 318 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 SPATA22Q8NHS9 363 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 GRIN3AQ8TCU5 1115 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 PBXIP1Q96AQ6 731 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 LRIG1Q96JA1 1093 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 PPP1R2P1Q96PQ5 205 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 RBM15Q96T37 977 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 FAM129BQ96TA1 746 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 ATP13A3Q9H7F0 1226 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 POLMQ9NP87 494 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 DLGAP2Q9P1A6 1054 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 WASF2Q9Y6W5 498 aa15.36■□□□□ 0.05
ATG4D-211ENST00000589753 FAM187AA6NFU0 413 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 LEFTY1O75610 366 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 ANXA9O76027 345 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 PIGNO95427 931 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 MT-CYBP00156 380 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 CTSLP07711 333 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 SERPINA4P29622 427 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 FDFT1P37268 417 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 COPAP53621 1224 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 GEMP55040 296 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 SKOR1P84550 965 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 BCL2L1Q07817 233 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 GPS1Q13098 491 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 MTAPQ13126 283 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 SLC14A2Q15849 920 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 ARSIQ5FYB1 569 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 FAXCQ5TGI0 409 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 MMAAQ8IVH4 418 aaKnown RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 NOA1Q8NC60 698 aaKnown RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 TMIEQ8NEW7 156 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 TADA1Q96BN2 335 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 OXNAD1Q96HP4 312 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 NSMCE3Q96MG7 304 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 GORASP1Q9BQQ3 440 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 TRIM51Q9BSJ1 452 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 COL25A1Q9BXS0 654 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 OSBPL1AQ9BXW6 950 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 RSPH9Q9H1X1 276 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 EPHX3Q9H6B9 360 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 CD248Q9HCU0 757 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 RRAGDQ9NQL2 400 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 UBP1Q9NZI7 540 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 ASIC3Q9UHC3 531 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 PPM1HQ9ULR3 514 aa15.35■□□□□ 0.05
ATG4D-211ENST00000589753 AAR2Q9Y312 384 aaKnown RBP15.35■□□□□ 0.05
ATG4D-211ENST00000589753 CKAP5Q14008 2032 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-211ENST00000589753 TCRBV21S2A2A0A5A6 115 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 C1QTNF3-AMACRE9PGA6 284 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 IL1BP01584 269 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 UGT2B4P06133 528 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 CA4P22748 312 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 ADCY8P40145 1251 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 BASP1P80723 227 aaKnown RBP15.34■□□□□ 0.05
ATG4D-211ENST00000589753 SATB1Q01826 763 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 MPP3Q13368 585 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 IHHQ14623 411 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 ZNF776Q68DI1 518 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-211ENST00000589753 GDPD4Q6W3E5 623 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 BMP8AQ7Z5Y6 402 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 TMPRSS6Q8IU80 811 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 CAMK1DQ8IU85 385 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 PIP4K2CQ8TBX8 421 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 VOPP1Q96AW1 172 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 ZNF641Q96N77 438 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-211ENST00000589753 LRRC1Q9BTT6 524 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 MLPHQ9BV36 600 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-211ENST00000589753 MKRN2Q9H000 416 aaKnown RBP15.34■□□□□ 0.05
ATG4D-211ENST00000589753 SUV39H2Q9H5I1 410 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 C2orf42Q9NWW7 574 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 SARDHQ9UL12 918 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 PCDHGC4Q9Y5F7 938 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 RAI2Q9Y5P3 530 aa15.34■□□□□ 0.05
ATG4D-211ENST00000589753 ATG2BQ96BY7 2078 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms