RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 LHX3Q9UBR4 397 aa17.14■□□□□ 0.33
H3F3B-208ENST00000589599 SEPT3Q9UH03 358 aa17.14■□□□□ 0.33
H3F3B-208ENST00000589599 FADS3Q9Y5Q0 445 aa17.14■□□□□ 0.33
H3F3B-208ENST00000589599 SNX11Q9Y5W9 270 aa17.14■□□□□ 0.33
H3F3B-208ENST00000589599 DNAH14Q0VDD8 3507 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 TSPAN6O43657 245 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 DFNA5O60443 496 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 MAGEC1O60732 1142 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 KCNK5O95279 499 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 IPO7O95373 1038 aaKnown RBP17.13■□□□□ 0.33
H3F3B-208ENST00000589599 ZNF883P0CG24 379 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 XPAP23025 273 aaPredicted RBP17.13■□□□□ 0.33
H3F3B-208ENST00000589599 IL4RP24394 825 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 SLC1A1P43005 524 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 NOP2P46087 812 aaKnown RBP17.13■□□□□ 0.33
H3F3B-208ENST00000589599 CSNK1DP48730 415 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
H3F3B-208ENST00000589599 RENBPP51606 427 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 ARSEP51690 589 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 NSUN2Q08J23 767 aaKnown RBP eCLIP17.13■□□□□ 0.33
H3F3B-208ENST00000589599 MMRN1Q13201 1228 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 DPYSL3Q14195 570 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 ATP13A4Q4VNC1 1196 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 ODF2Q5BJF6 829 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 KIAA1161Q6NSJ0 714 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 CPNE8Q86YQ8 564 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 TMTC1Q8IUR5 882 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 LRRC49Q8IUZ0 686 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 MFSD2AQ8NA29 543 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 HCAR2Q8TDS4 363 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 EXOC2Q96KP1 924 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 ZNF670Q9BS34 389 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 DKK3Q9UBP4 350 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
H3F3B-208ENST00000589599 PI4KAP42356 2102 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 CACNA1AO00555 2505 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 TLR4O00206 839 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 SLC31A1O15431 190 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 INSIG1O15503 277 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 LCA5LO95447 670 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 CD48P09326 243 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 CEACAM1P13688 526 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 AKT2P31751 481 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 CTSKP43235 329 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 SUOXP51687 545 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 OVGP1Q12889 678 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 SGCGQ13326 291 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 LBRQ14739 615 aaKnown RBP17.12■□□□□ 0.33
H3F3B-208ENST00000589599 SUZ12Q15022 739 aaKnown RBP17.12■□□□□ 0.33
H3F3B-208ENST00000589599 ZNF284Q2VY69 593 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 ANKRD20A8PQ5CZ79 823 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 PSAPL1Q6NUJ1 521 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 LAYNQ6UX15 382 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 ARHGAP36Q6ZRI8 547 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 SRLQ86TD4 932 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 IQCHQ86VS3 1027 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
H3F3B-208ENST00000589599 KLK6Q92876 244 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 ZNF641Q96N77 438 aaPredicted RBP17.12■□□□□ 0.33
H3F3B-208ENST00000589599 TUBGCP5Q96RT8 1024 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 ATP13A3Q9H7F0 1226 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 GDF3Q9NR23 364 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 TM7SF3Q9NS93 570 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 KLHL11Q9NVR0 708 aa17.12■□□□□ 0.33
H3F3B-208ENST00000589599 CHD5Q8TDI0 1954 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 A0A1W2PR77 199 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 WNT9AO14904 365 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 GJB3O75712 270 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 CD59P13987 128 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 PRLRP16471 622 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 HSPA9P38646 679 aaKnown RBP17.11■□□□□ 0.33
H3F3B-208ENST00000589599 HNRNPDQ14103 355 aaKnown RBP17.11■□□□□ 0.33
H3F3B-208ENST00000589599 ZNF235Q14590 738 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 PIP4P1Q86T03 277 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 TP53INP2Q8IXH6 220 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 PAF1Q8N7H5 531 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 DEFB124Q8NES8 71 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 PCDH19Q8TAB3 1148 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 PSKH2Q96QS6 385 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 SLC17A9Q9BYT1 436 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 SUV39H2Q9H5I1 410 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 IL21RQ9HBE5 538 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 PCDHGB2Q9Y5G2 931 aa17.11■□□□□ 0.33
H3F3B-208ENST00000589599 EPN1Q9Y6I3 576 aaPredicted RBP17.11■□□□□ 0.33
H3F3B-208ENST00000589599 KCNK3O14649 394 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 SPOPO43791 374 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 MAFKO60675 156 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 WNT1P04628 370 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 TIMP2P16035 220 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 HNRNPA2B1P22626 353 aaKnown RBP17.1■□□□□ 0.33
H3F3B-208ENST00000589599 KDELR1P24390 212 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 SERPINA4P29622 427 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 ABL2P42684 1182 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 SLC10A7Q0GE19 358 aa17.1■□□□□ 0.33
H3F3B-208ENST00000589599 PAFAH1B3Q15102 231 aaKnown RBP17.1■□□□□ 0.33
H3F3B-208ENST00000589599 ZNF423Q2M1K9 1284 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms