RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 NCEH1Q6PIU2 408 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 ARHGAP36Q6ZRI8 547 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 RYBPQ8N488 228 aaPredicted RBP17.13■□□□□ 0.33
VAT1-204ENST00000587147 TEX26Q8N6G2 289 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 PLD5Q8N7P1 536 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 MAML1Q92585 1016 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 VOPP1Q96AW1 172 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 ARRDC3Q96B67 414 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 BIRC7Q96CA5 298 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 DESI2Q9BSY9 194 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 ATP13A3Q9H7F0 1226 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 DTLQ9NZJ0 730 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 DMTF1Q9Y222 760 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 CACNA1EQ15878 2313 aa17.13■□□□□ 0.33
VAT1-204ENST00000587147 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.12■□□□□ 0.33
VAT1-204ENST00000587147 TSPAN11A1L157 253 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 MATN3O15232 486 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 IGHV4-34P06331 123 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 ADRB3P13945 408 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 TGM2P21980 687 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 CETN2P41208 172 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 LIMK1P53667 647 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 PPIDQ08752 370 aaKnown RBP17.12■□□□□ 0.33
VAT1-204ENST00000587147 PDK1Q15118 436 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 ATXN7L2Q5T6C5 722 aaPredicted RBP17.12■□□□□ 0.33
VAT1-204ENST00000587147 ALG1LQ6GMV1 187 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 FBXL19Q6PCT2 694 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 BRAT1Q6PJG6 821 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 MFSD7Q6UXD7 560 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 SPOCD1Q6ZMY3 1216 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 SRLQ86TD4 932 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 TP53INP2Q8IXH6 220 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 RGL4Q8IZJ4 473 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 C12orf50Q8NA57 414 aaPredicted RBP17.12■□□□□ 0.33
VAT1-204ENST00000587147 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
VAT1-204ENST00000587147 C1orf216Q8TAB5 229 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 MGME1Q9BQP7 344 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
VAT1-204ENST00000587147 ZDHHC5Q9C0B5 715 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 CAPN10Q9HC96 672 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 TMEM74BQ9NUR3 256 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 SLC6A14Q9UN76 642 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 HYOU1Q9Y4L1 999 aa17.12■□□□□ 0.33
VAT1-204ENST00000587147 PI4KAP42356 2102 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3DA0A087WVF3 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3IA0A087WXS9 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3EA0A087X179 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3KA0A087X1G2 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 A0A1W2PPC4 97 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 GRID2IPA4D2P6 1211 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3FA6NER0 549 aaPredicted RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 C16orf96A6NNT2 1141 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3LB9A6J9 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 PPP1R12AO14974 1030 aaPredicted RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 TSPAN6O43657 245 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 RNGTTO60942 597 aaKnown RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 SOCS5O75159 536 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 UGT2B4P06133 528 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3HP0C7X1 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 CR2P20023 1033 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 SERPINA4P29622 427 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 MMP13P45452 471 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 METAP1P53582 386 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 RWDD2BP57060 319 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TAS2R38P59533 333 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 CCZ1BP86790 482 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 CCZ1P86791 482 aaPredicted RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 GBE1Q04446 702 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 SLC10A7Q0GE19 358 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3GQ6DHY5 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3CQ6IPX1 549 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 KIAA1161Q6NSJ0 714 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 PARS2Q7L3T8 475 aaKnown RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 RFX6Q8HWS3 928 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 TBC1D3Q8IZP1 549 aaPredicted RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
VAT1-204ENST00000587147 OLFM3Q96PB7 478 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 NUDCD1Q96RS6 583 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 GOLPH3Q9H4A6 298 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 AMFRQ9UKV5 643 aa17.11■□□□□ 0.33
VAT1-204ENST00000587147 SHROOM3Q8TF72 1996 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 hCG_1818297A0A087WSY0 165 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 BCAT2O15382 392 aaPredicted RBP17.1■□□□□ 0.33
VAT1-204ENST00000587147 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
VAT1-204ENST00000587147 SYPP08247 313 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 GRIA4P48058 902 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 PEX5P50542 639 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 AFF3P51826 1226 aaKnown RBP17.1■□□□□ 0.33
VAT1-204ENST00000587147 RACK1P63244 317 aaKnown RBP17.1■□□□□ 0.33
VAT1-204ENST00000587147 SETMARQ53H47 684 aaPredicted RBP17.1■□□□□ 0.33
VAT1-204ENST00000587147 TRIM61Q5EBN2 209 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 PEX26Q7Z412 305 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
VAT1-204ENST00000587147 DEFB119Q8N690 84 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 UBL4BQ8N7F7 174 aa17.1■□□□□ 0.33
VAT1-204ENST00000587147 OR6K2Q8NGY2 324 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms