RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SELENOSQ9BQE4 189 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 MGME1Q9BQP7 344 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 FEM1AQ9BSK4 669 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 FAM167BQ9BTA0 163 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 TMEM109Q9BVC6 243 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 APOL5Q9BWW9 433 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 TXLNGYQ9BZA5 131 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 ACSS3Q9H6R3 686 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 NOL6Q9H6R4 1146 aaKnown RBP6.27□□□□□ -1.41
LIG3-206ENST00000586058 ATP13A3Q9H7F0 1226 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 PLK2Q9NYY3 685 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 UBP1Q9NZI7 540 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 VPS51Q9UID3 782 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 CDH7Q9ULB5 785 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 CCL26Q9Y258 94 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 ARIH1Q9Y4X5 557 aaPredicted RBP6.27□□□□□ -1.41
LIG3-206ENST00000586058 WNT6Q9Y6F9 365 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 TEX264Q9Y6I9 313 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 RPS6KL1Q9Y6S9 549 aa6.27□□□□□ -1.41
LIG3-206ENST00000586058 FAM237BA0A1B0GVD1 139 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 TCRBV9S1A1TA0A576 114 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 C3orf80F5H4A9 247 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 POLR3GO15318 223 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 INSIG1O15503 277 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 USP12O75317 370 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 BANF1O75531 89 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 TCEA3O75764 348 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MT-CYBP00156 380 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 PENKP01210 267 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 ADRA1DP25100 572 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 SSTR1P30872 391 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 MAGEA3P43357 314 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 SGSHP51688 502 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PLK1P53350 603 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 WNT3AP56704 352 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PRAMEP78395 509 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 DSC2Q02487 901 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CDK18Q07002 472 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 BCL2L1Q07817 233 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 HYAL1Q12794 435 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 LMAN2Q12907 356 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MTM1Q13496 603 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 THOC5Q13769 683 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 SPARCL1Q14515 664 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CBX2Q14781 532 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 POU6F1Q14863 301 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CRYMQ14894 314 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 FASTKD3Q14CZ7 662 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 EIF4HQ15056 248 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 LRIT3Q3SXY7 679 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ACCSLQ4AC99 568 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PITRM1Q5JRX3 1037 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 LY6G5CQ5SRR4 150 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 FYB2Q5VWT5 728 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 KCTD16Q68DU8 428 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 KCTD11Q693B1 232 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ALG1LQ6GMV1 187 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 GRAMD4Q6IC98 578 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ZNF449Q6P9G9 518 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 LEKR1Q6ZMV7 388 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 GLT6D1Q7Z4J2 308 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PACS2Q86VP3 889 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 KCNMB4Q86W47 210 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 SLC26A11Q86WA9 606 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 LMNTD2Q8IXW0 634 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PCDH20Q8N6Y1 951 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 SPATA22Q8NHS9 363 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ITFG1Q8TB96 612 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CSGALNACT1Q8TDX6 532 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ADAMTS19Q8TE59 1207 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PDCD6IPQ8WUM4 868 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.26□□□□□ -1.41
LIG3-206ENST00000586058 TTC17Q96AE7 1141 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MTBPQ96DY7 904 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MRRFQ96E11 262 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 CERS2Q96G23 380 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MYO19Q96H55 970 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 EXOC2Q96KP1 924 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ASB16Q96NS5 453 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 SH3GL2Q99962 352 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 APOL2Q9BQE5 337 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MLPHQ9BV36 600 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 ACE2Q9BYF1 805 aaPredicted RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 CIPCQ9C0C6 399 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CEP44Q9C0F1 390 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 PDFQ9HBH1 243 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 TMBIM4Q9HC24 238 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MRM3Q9HC36 420 aaKnown RBP6.26□□□□□ -1.41
LIG3-206ENST00000586058 LRRC4CQ9HCJ2 640 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 CASS4Q9NQ75 786 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ABCB8Q9NUT2 735 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 SYBUQ9NX95 663 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 NKIRAS1Q9NYS0 192 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 HACD3Q9P035 362 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 MARK1Q9P0L2 795 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 ZNF212Q9UDV6 495 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 TBK1Q9UHD2 729 aa6.26□□□□□ -1.41
LIG3-206ENST00000586058 SOX13Q9UN79 622 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms