RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 NYNRINQ9P2P1 1898 aaKnown RBP17.15■□□□□ 0.34
HMG20B-215ENST00000585741 TTC34A8MYJ7 566 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 K7EQS6 105 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 SYNCRIPO60506 623 aaKnown RBP17.14■□□□□ 0.33
HMG20B-215ENST00000585741 CD160O95971 181 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 EPHX1P07099 455 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 SERPINF2P08697 491 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 MRPS21P82921 87 aaKnown RBP17.14■□□□□ 0.33
HMG20B-215ENST00000585741 NSUN2Q08J23 767 aaKnown RBP eCLIP17.14■□□□□ 0.33
HMG20B-215ENST00000585741 STARD3Q14849 445 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 PTPRNQ16849 979 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 C2orf27AQ580R0 203 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 RALGPS1Q5JS13 557 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 DGKKQ5KSL6 1271 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 EGFLAMQ63HQ2 1017 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 Q6ZVU0 165 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 SRLQ86TD4 932 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 SFTPA1Q8IWL2 248 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 CNTD1Q8N815 330 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 GLIS1Q8NBF1 620 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 LRRN4CLQ8ND94 238 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 OR2AP1Q8NGE2 309 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 RMDN1Q96DB5 314 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 MRGPRX3Q96LB0 322 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 FCRL5Q96RD9 977 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 NUDCD1Q96RS6 583 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 HECAQ9UBI9 543 aaPredicted RBP17.14■□□□□ 0.33
HMG20B-215ENST00000585741 LHX3Q9UBR4 397 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 SHROOM3Q8TF72 1996 aa17.14■□□□□ 0.33
HMG20B-215ENST00000585741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.13■□□□□ 0.33
HMG20B-215ENST00000585741 SHISA7A6NL88 538 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 INSIG1O15503 277 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
HMG20B-215ENST00000585741 CD86P42081 329 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 AP1S1P61966 158 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 SARNPP82979 210 aaKnown RBP17.13■□□□□ 0.33
HMG20B-215ENST00000585741 DSC2Q02487 901 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 GRM3Q14832 879 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 FAM182AQ5T1J6 154 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 ATXN7L2Q5T6C5 722 aaPredicted RBP17.13■□□□□ 0.33
HMG20B-215ENST00000585741 FAXCQ5TGI0 409 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 EMC10Q5UCC4 262 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 IZUMO3Q5VZ72 239 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 IFT20Q8IY31 132 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 IFT43Q96FT9 208 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 RBM15Q96T37 977 aaKnown RBP eCLIP17.13■□□□□ 0.335e-7■□□□□ 9.5
HMG20B-215ENST00000585741 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 ZDHHC6Q9H6R6 413 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 ETNK1Q9HBU6 452 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 EPB41L5Q9HCM4 733 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 FAM114A2Q9NRY5 505 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 CACNA2D2Q9NY47 1150 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 FAM153AQ9UHL3 310 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 TPX2Q9ULW0 747 aaKnown RBP17.13■□□□□ 0.33
HMG20B-215ENST00000585741 SNX24Q9Y343 169 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 STON1Q9Y6Q2 735 aa17.13■□□□□ 0.33
HMG20B-215ENST00000585741 CEP250Q9BV73 2442 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 DNALI1O14645 258 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 RNF40O75150 1001 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 METTL18O95568 372 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 KLF8O95600 359 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 POP4O95707 220 aaKnown RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 APRTP07741 180 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 HLA-EP13747 358 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 NTSR1P30989 418 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 CD68P34810 354 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 IL12RB1P42701 662 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 WASP42768 502 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 CSNK1DP48730 415 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 BCL2L1Q07817 233 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 MPP3Q13368 585 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 HNRNPA1L2Q32P51 320 aaKnown RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 HSF5Q4G112 596 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 DSG4Q86SJ6 1040 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 PPIL6Q8IXY8 311 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 PGBD5Q8N414 524 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 ZNF366Q8N895 744 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 SUMF1Q8NBK3 374 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 OR8D1Q8WZ84 308 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 HEPHQ9BQS7 1158 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 ATP13A3Q9H7F0 1226 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 VPS45Q9NRW7 570 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 EVLQ9UI08 416 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 ANAPC5Q9UJX4 755 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 NEU2Q9Y3R4 380 aa17.12■□□□□ 0.33
HMG20B-215ENST00000585741 V9GYY5 206 aaPredicted RBP17.12■□□□□ 0.33
HMG20B-215ENST00000585741 CHD5Q8TDI0 1954 aa17.11■□□□□ 0.33
HMG20B-215ENST00000585741 TTC24A2A3L6 582 aaPredicted RBP17.11■□□□□ 0.33
HMG20B-215ENST00000585741 ERI2A8K979 691 aaKnown RBP17.11■□□□□ 0.33
HMG20B-215ENST00000585741 SMAPO00193 183 aa17.11■□□□□ 0.33
HMG20B-215ENST00000585741 MUSKO15146 869 aa17.11■□□□□ 0.33
HMG20B-215ENST00000585741 RNASEH1O60930 286 aaKnown RBP17.11■□□□□ 0.33
HMG20B-215ENST00000585741 PMPCBO75439 489 aa17.11■□□□□ 0.33
HMG20B-215ENST00000585741 ITIH2P19823 946 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms