RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 ZNF185O15231 689 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 MID1O15344 667 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 HRO43593 1189 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 CEP104O60308 925 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 POP4O95707 220 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 IGSF6O95976 241 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 JCHAINP01591 159 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 RBP3P10745 1247 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 MSNP26038 577 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 PTPN3P26045 913 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 RBL1P28749 1068 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 P2RY2P41231 377 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 RENBPP51606 427 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 MAXP61244 160 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 ZBTB16Q05516 673 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 AP1B1Q10567 949 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 ARSIQ5FYB1 569 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 NCEH1Q6PIU2 408 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 SRLQ86TD4 932 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 ARRDC2Q8TBH0 407 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 TFB1MQ8WVM0 346 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 PRCCQ92733 491 aaPredicted RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 MS4A14Q96JA4 679 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 GDAP1L1Q96MZ0 367 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 CINPQ9BW66 212 aaPredicted RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 CPEB1Q9BZB8 566 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 PABPC3Q9H361 631 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 USP29Q9HBJ7 922 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 NT5MQ9NPB1 228 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 SEMA4GQ9NTN9 838 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 RBM22Q9NW64 420 aaKnown RBP eCLIP13.5□□□□□ -0.257e-10■■■□□ 17.6
CHAF1A-202ENST00000585371 SERGEFQ9UGK8 458 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 IL36AQ9UHA7 158 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 AMACRQ9UHK6 382 aa13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 TTC7AQ9ULT0 858 aaPredicted RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
CHAF1A-202ENST00000585371 DNAH14Q0VDD8 3507 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 IGHV1OR15-9A0A0B4J2B8 117 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 CES2O00748 559 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 LEFTY1O75610 366 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 IL1BP01584 269 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 FGGP02679 453 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 PRLRP16471 622 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 SLC8A1P32418 973 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 CD68P34810 354 aaPredicted RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 HSPA9P38646 679 aaKnown RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 RECQLP46063 649 aaPredicted RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 PSMD8P48556 350 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 SRSF5Q13243 272 aaKnown RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 ZNF235Q14590 738 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 OASLQ15646 514 aaKnown RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 TEX44Q53QW1 395 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 CCDC181Q5TID7 509 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 KIAA1324Q6UXG2 1013 aaKnown RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 PRR23CQ6ZRP0 262 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 CEP68Q76N32 757 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 ADAT2Q7Z6V5 191 aaKnown RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 GRIN3AQ8TCU5 1115 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 RLN3Q8WXF3 142 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 ATG4AQ8WYN0 398 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 LRIG1Q96JA1 1093 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 CCDC114Q96M63 670 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 NAPGQ99747 312 aaPredicted RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 CEP41Q9BYV8 373 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 ZDHHC6Q9H6R6 413 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 SMARCAL1Q9NZC9 954 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 BCCIPQ9P287 314 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 MBD1Q9UIS9 605 aaPredicted RBP13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 DNPEPQ9ULA0 475 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 NCOR2Q9Y618 2525 aa13.49□□□□□ -0.25
CHAF1A-202ENST00000585371 H7C0C1 242 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 PLK4O00444 970 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 LIASO43766 372 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 ADH1BP00325 375 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 PRNPP04156 253 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 MMP2P08253 660 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 C5AR1P21730 350 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 BCKDHBP21953 392 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 ATP5OP48047 213 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 SCNN1BP51168 640 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 TPMTP51580 245 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 DSC2Q02487 901 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 POM121L1PQ3SYA9 428 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 PIP5KL1Q5T9C9 394 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 CREG2Q8IUH2 290 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 ZNF567Q8N184 647 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 PGBD3Q8N328 593 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 FAM160A2Q8N612 972 aaPredicted RBP13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 PRELID2Q8N945 189 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 ACTRT1Q8TDG2 376 aa13.48□□□□□ -0.25
CHAF1A-202ENST00000585371 NSMCE1Q8WV22 266 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms