RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 HOXC13P31276 330 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 BMP8BP34820 402 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HTR7P34969 479 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PGM1P36871 562 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TRMT5Q32P41 509 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 FAM182AQ5T1J6 154 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NADSYN1Q6IA69 706 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 RINLQ6ZS11 566 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PDZD4Q76G19 769 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ARID3BQ8IVW6 561 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NPWQ8N729 165 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PPFIBP2Q8ND30 876 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PLD4Q96BZ4 506 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SLC13A1Q9BZW2 595 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NMUR2Q9GZQ4 415 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 LMAN2LQ9H0V9 348 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CATSPERBQ9H7T0 1116 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SMPD4Q9NXE4 827 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MPP6Q9NZW5 540 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MYO9BQ13459 2157 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 B2RBV5 119 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 FGF10O15520 208 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PTPN2P17706 415 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 AOC1P19801 751 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HOXA9P31269 272 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NIPAL4Q0D2K0 466 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PDK1Q15118 436 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ACSBG2Q5FVE4 666 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ZNF683Q8IZ20 524 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TTC8Q8TAM2 541 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PIWIL2Q8TC59 973 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 WBP2Q969T9 261 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CCDC106Q9BWC9 280 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 DNMT3BQ9UBC3 853 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 LRCH1Q9Y2L9 728 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CDH23Q9H251 3354 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NOTCH4Q99466 2003 aa15.19■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ACSL4O60488 711 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TM7SF2O76062 418 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 OLFM2O95897 454 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 KLKB1P03952 638 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HNRNPA1P09651 372 aaKnown RBP eCLIP15.18■□□□□ 0.028e-6■□□□□ 10.1
CDK5RAP3-236ENST00000584991 CORO1AP31146 461 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SERPINB6P35237 376 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CCR2P41597 374 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NRIP1P48552 1158 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MTA1Q13330 715 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MUM1Q2TAK8 710 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CAPRIN2Q6IMN6 1127 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 IRGCQ6NXR0 463 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 FBXL22Q6P050 247 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ZFRQ96KR1 1074 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 LGMNQ99538 433 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 IGSF9Q9P2J2 1179 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 DPP7Q9UHL4 492 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ANGPTL2Q9UKU9 493 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SHROOM3Q8TF72 1996 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NCAM2O15394 837 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 XYLBO75191 536 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 RHOP08100 348 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TACR2P21452 398 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 GARSP41250 739 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SLC11A2P49281 568 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 AQP5P55064 265 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SMAD3P84022 425 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 KLC1Q07866 573 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 AP1B1Q10567 949 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MROH9Q5TGP6 573 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 RFWD3Q6PCD5 774 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TRMT10BQ6PF06 316 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SCUBE1Q8IWY4 988 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PDCD7Q8N8D1 485 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CCNYQ8ND76 341 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 IGSF8Q969P0 613 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TCEAL4Q96EI5 215 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CELF6Q96J87 481 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ZYG11BQ9C0D3 744 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 BRD8Q9H0E9 1235 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PRDM12Q9H4Q4 367 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 GPAMQ9HCL2 828 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PCMTD2Q9NV79 361 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NDFIP2Q9NV92 336 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ZFATQ9P243 1243 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PPARGC1AQ9UBK2 798 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CPQQ9Y646 472 aa15.18■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CCDC195A0A1B0GUA6 201 aa15.17■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ERI2A8K979 691 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CIB2O75838 187 aa15.17■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CNTN5O94779 1100 aa15.17■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CKMP06732 381 aa15.17■□□□□ 0.02
CDK5RAP3-236ENST00000584991 POLBP06746 335 aa15.17■□□□□ 0.02
CDK5RAP3-236ENST00000584991 SLC6A4P31645 630 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms