RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FBXL12Q9NXK8 326 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 CYP8B1Q9UNU6 501 aa14.06□□□□□ -0.16
TRAF4-215ENST00000584944 GOLGA6L10A0A0M3HER8 536 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 NEMP1O14524 444 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 LEFTY1O75610 366 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 JCHAINP01591 159 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 TCP1P17987 556 aaKnown RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 CES1P23141 567 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 NFKBIAP25963 317 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 CASQ1P31415 396 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 ACTN2P35609 894 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 AP1S1P61966 158 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 RPS14P62263 151 aaKnown RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 BCL2L1Q07817 233 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 NSUN2Q08J23 767 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 SRSF5Q13243 272 aaKnown RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 CYTH1Q15438 398 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 ELF2Q15723 593 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 SLC45A4Q5BKX6 768 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 DCAF12L1Q5VU92 463 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 FBXL19Q6PCT2 694 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 SLC36A4Q6YBV0 504 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 SRLQ86TD4 932 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 RASSF3Q86WH2 238 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 SLC13A5Q86YT5 568 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 HDDC3Q8N4P3 179 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 TSEN2Q8NCE0 465 aaKnown RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 TMIEQ8NEW7 156 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 FATE1Q969F0 183 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 LRRC45Q96CN5 670 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 FRMD8P1Q9BZ68 369 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 PABPC3Q9H361 631 aaKnown RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 HOMER3Q9NSC5 361 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 KLHL8Q9P2G9 620 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 AMACRQ9UHK6 382 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 EVLQ9UI08 416 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 INVSQ9Y283 1065 aa14.05□□□□□ -0.16
TRAF4-215ENST00000584944 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.05□□□□□ -0.16
TRAF4-215ENST00000584944 ACACBO00763 2458 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 DCDC2BA2VCK2 349 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 PGRMC1O00264 195 aaKnown RBP14.04□□□□□ -0.16
TRAF4-215ENST00000584944 MID1O15344 667 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 ATP1A1P05023 1023 aaKnown RBP14.04□□□□□ -0.16
TRAF4-215ENST00000584944 UGT2B4P06133 528 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 RBP3P10745 1247 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 TPMTP51580 245 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 COPAP53621 1224 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 ADCY2Q08462 1091 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 NOMO1Q15155 1222 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 GDPD4Q6W3E5 623 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-215ENST00000584944 GSTA5Q7RTV2 222 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-215ENST00000584944 CHST14Q8NCH0 376 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 PDCD6IPQ8WUM4 868 aaKnown RBP14.04□□□□□ -0.16
TRAF4-215ENST00000584944 LRRN4Q8WUT4 740 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 RLN3Q8WXF3 142 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 AGAP3Q96P47 875 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 OLFM3Q96PB7 478 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 QKIQ96PU8 341 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAF4-215ENST00000584944 TUBGCP5Q96RT8 1024 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 FAM129BQ96TA1 746 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 VAT1Q99536 393 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 FAM118BQ9BPY3 351 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 BTBD1Q9H0C5 482 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 KCND1Q9NSA2 647 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 SEMA4GQ9NTN9 838 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 LHX3Q9UBR4 397 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 PPM1HQ9ULR3 514 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 ZNF148Q9UQR1 794 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 ZKSCAN5Q9Y2L8 839 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 CACNA1BQ00975 2339 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 EPG5Q9HCE0 2579 aa14.04□□□□□ -0.16
TRAF4-215ENST00000584944 SPAG17Q6Q759 2223 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 A0A1W2PP55 124 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 FAM47DPA6NHR8 397 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 LRRC72A6NJI9 287 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 RNF103O00237 685 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 KCNN4O15554 427 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 CD160O95971 181 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 CD6P30203 668 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 CSNK1DP48730 415 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 MAXP61244 160 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 POLR2LP62875 67 aaKnown RBP14.03□□□□□ -0.16
TRAF4-215ENST00000584944 IFI35P80217 286 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-215ENST00000584944 RPL6Q02878 288 aaKnown RBP14.03□□□□□ -0.16
TRAF4-215ENST00000584944 PRKD1Q15139 912 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-215ENST00000584944 CSRP2Q16527 193 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 ZNF805Q5CZA5 627 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 RALGPS1Q5JS13 557 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 ITPRIPL1Q6GPH6 555 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 CCDC70Q6NSX1 233 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 USP30Q70CQ3 517 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 B4GALNT4Q76KP1 1039 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 LPCAT2Q7L5N7 544 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 NDUFAF2Q8N183 169 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 NETO1Q8TDF5 533 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms