RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 GKP32189 559 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 GRIA4P48058 902 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 RACK1P63244 317 aaKnown RBP16.47■□□□□ 0.23
ERBB2-222ENST00000584908 GALNT2Q10471 571 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 GDPD4Q6W3E5 623 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 PARS2Q7L3T8 475 aaKnown RBP16.47■□□□□ 0.23
ERBB2-222ENST00000584908 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-222ENST00000584908 SPC24Q8NBT2 197 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 OR6K2Q8NGY2 324 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 HCAR2Q8TDS4 363 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 FATE1Q969F0 183 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 RAB7BQ96AH8 199 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 RNF157Q96PX1 679 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 MIR1-1HGQ9H1L0 117 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 TMEM9BQ9NQ34 198 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 DDX56Q9NY93 547 aaKnown RBP16.47■□□□□ 0.23
ERBB2-222ENST00000584908 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 TFR2Q9UP52 801 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 DMTF1Q9Y222 760 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 ALG6Q9Y672 507 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 C16orf96A6NNT2 1141 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 PSTPIP1O43586 416 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 MFSD11O43934 449 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 UGT2B4P06133 528 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 NOP2P46087 812 aaKnown RBP16.46■□□□□ 0.23
ERBB2-222ENST00000584908 RENBPP51606 427 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 VAV2P52735 878 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 BNC1Q01954 994 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 ATPAF2Q8N5M1 289 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 TSEN2Q8NCE0 465 aaKnown RBP16.46■□□□□ 0.23
ERBB2-222ENST00000584908 TUBGCP5Q96RT8 1024 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 SEPT3Q9UH03 358 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 FADS3Q9Y5Q0 445 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 TMEM131Q92545 1883 aa16.46■□□□□ 0.23
ERBB2-222ENST00000584908 TSPAN11A1L157 253 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 LRRD1A4D1F6 860 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 C4orf47A7E2U8 309 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 MUSKO15146 869 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SPOPO43791 374 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 GJB3O75712 270 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 HSPA9P38646 679 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 GARSP41250 739 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 RGRP47804 291 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 GSDMDP57764 484 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SLC10A7Q0GE19 358 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 GRIK2Q13002 908 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 LBRQ14739 615 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 TAZQ16635 292 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 TMEM259Q4ZIN3 620 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SLC9A4Q6AI14 798 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 FBXL19Q6PCT2 694 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SRLQ86TD4 932 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 PRPF39Q86UA1 669 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 ZSCAN30Q86W11 494 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 HORMAD1Q86X24 394 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 ACRBPQ8NEB7 543 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 TPCN2Q8NHX9 752 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SPOCK2Q92563 424 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 EXOC2Q96KP1 924 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 ZNF641Q96N77 438 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 KLHL32Q96NJ5 620 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 TSGA13Q96PP4 275 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 CINPQ9BW66 212 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 LACRTQ9GZZ8 138 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 FSCN3Q9NQT6 498 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 DNAAF2Q9NVR5 837 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 CABIN1Q9Y6J0 2220 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 A0A1W2PR77 199 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 GOLGA6L6A8MZA4 724 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 AREL1O15033 823 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 VILLO15195 856 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 INSIG1O15503 277 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SPINT1O43278 529 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 RNGTTO60942 597 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 CR2P20023 1033 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 MAPK8P45983 427 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 CSNK1EP49674 416 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SUOXP51687 545 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 TEAD4Q15561 434 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SETMARQ53H47 684 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 NAPEPLDQ6IQ20 393 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 KIAA1161Q6NSJ0 714 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 TEX26Q8N6G2 289 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 PLD5Q8N7P1 536 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 SUV39H2Q9H5I1 410 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 DTLQ9NZJ0 730 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 ZFR2Q9UPR6 939 aaKnown RBP16.45■□□□□ 0.22
ERBB2-222ENST00000584908 HYOU1Q9Y4L1 999 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 DUSP10Q9Y6W6 482 aa16.45■□□□□ 0.22
ERBB2-222ENST00000584908 LRRK1Q38SD2 2015 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 A0A1B0GVT2 93 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 A0A1W2PQU0 124 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 UPK3BL1B0FP48 263 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 UPK3BL2E5RIL1 263 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 TSPAN6O43657 245 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 KRT1P04264 644 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 MX2P20592 715 aa16.44■□□□□ 0.22
ERBB2-222ENST00000584908 CCNCP24863 283 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms