RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ATXN2Q99700 1313 aaKnown RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 DCLK1O15075 740 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 STX7O15400 261 aaKnown RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 SORBS2O94875 1100 aaKnown RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 PSMG1O95456 288 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 GLP2RO95838 553 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 SERPINF2P08697 491 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 SLC2A3P11169 496 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 VHLP40337 213 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 SLC1A2P43004 574 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 GLUD2P49448 558 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 OXCT1P55809 520 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 PPIDQ08752 370 aaKnown RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 CDH18Q13634 790 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 POM121L1PQ3SYA9 428 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 FAM219BQ5XKK7 198 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 ALKAL1Q6UXT8 129 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 NAPRTQ6XQN6 538 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 DDI1Q8WTU0 396 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 ARNTL2Q8WYA1 636 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 UTP4Q969X6 686 aaKnown RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 LENG8Q96PV6 779 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 SMIM14Q96QK8 99 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 RRN3Q9NYV6 651 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 RCOR3Q9P2K3 495 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-217ENST00000584582 ZNF180Q9UJW8 692 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 BTRCQ9Y297 605 aa11.42□□□□□ -0.58
TOP3A-217ENST00000584582 KCNU1A8MYU2 1149 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 KATNA1O75449 491 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 HADHAP40939 763 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 SLC11A2P49281 568 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 INHBEP58166 350 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 VEPH1Q14D04 833 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 GALNTL6Q49A17 601 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 TEDDM1Q5T9Z0 273 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 AGAP9Q5VTM2 703 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 OR13C4Q8NGS5 318 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 RCN3Q96D15 328 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 VAT1Q99536 393 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 SEMA4BQ9NPR2 832 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 ARL5AQ9Y689 179 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 DOCK1Q14185 1865 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 LMNAP02545 664 aaKnown RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 CKBP12277 381 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 MLNP12872 115 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 TSHRP16473 764 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 RAB10P61026 200 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 CCDC153Q494R4 210 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 LPCAT4Q643R3 524 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 FBXL22Q6P050 247 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 LRRC74BQ6ZQY2 392 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 RAB3IL1Q8TBN0 382 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 DNAJC1Q96KC8 554 aaKnown RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 NPAS2Q99743 824 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 VCX3BQ9H321 246 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 CD274Q9NZQ7 290 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 IGSF9Q9P2J2 1179 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 MAGEB16A2A368 324 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 TRIM16O95361 564 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 OAS1P00973 400 aaKnown RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 FGFR3P22607 806 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 ETV4P43268 484 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 KLC1Q07866 573 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 SLC20A2Q08357 652 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 CYTH1Q15438 398 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 DIS3LQ8TF46 1054 aaKnown RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 KCTD13Q8WZ19 329 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 CENPIQ92674 756 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-217ENST00000584582 SERPINI1Q99574 410 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 ENTPD7Q9NQZ7 604 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 EURLQ9NYK6 297 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 ADAM28Q9UKQ2 775 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 SLC45A1Q9Y2W3 748 aa11.41□□□□□ -0.58
TOP3A-217ENST00000584582 A0A0D9SEW6 157 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 SEC24DO94855 1032 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 IDH3AP50213 366 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 RPL14P50914 215 aaKnown RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 CYLC2Q14093 348 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 DPYSQ14117 519 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PCLAFQ15004 111 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 TAZQ16635 292 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 ZNF789Q5FWF6 425 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MARK2Q7KZI7 788 aaKnown RBP11.4□□□□□ -0.58
TOP3A-217ENST00000584582 SEMA6AQ9H2E6 1030 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 RHOJQ9H4E5 214 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 DONSONQ9NYP3 566 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MOCS1Q9NZB8 636 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 HEATR9A2RTY3 570 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PSMD3O43242 534 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 SH3BGRLO75368 114 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 MPOP05164 745 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 PRSS56P0CW18 603 aa11.4□□□□□ -0.58
TOP3A-217ENST00000584582 ARSAP15289 507 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms