RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TUBB2BQ9BVA1 445 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 HOMER3Q9NSC5 361 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 CYP8B1Q9UNU6 501 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 MRFAP1Q9Y605 127 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 NCOR2Q9Y618 2525 aa16.23■□□□□ 0.19
CSNK1D-223ENST00000584472 THADAQ6YHU6 1953 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 H7C0C1 242 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 KRIT1O00522 736 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 MATN3O15232 486 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 CD160O95971 181 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 DNTTP04053 509 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 VAV1P15498 845 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 ATP5OP48047 213 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 AP1B1Q10567 949 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 CST6Q15828 149 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 CYP1B1Q16678 543 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 DNTTIP2Q5QJE6 756 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 C22orf39Q6P5X5 142 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 DRICH1Q6PGQ1 229 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 Q6ZVU0 165 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 USP30Q70CQ3 517 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 CDKL3Q8IVW4 592 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 PCDH20Q8N6Y1 951 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 OR8D1Q8WZ84 308 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 MAML1Q92585 1016 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 FATE1Q969F0 183 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 ISG20Q96AZ6 181 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 ZNF599Q96NL3 588 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 FAM129BQ96TA1 746 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 ARRDC1-AS1Q9H2J1 176 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 ACTL7AQ9Y615 435 aa16.22■□□□□ 0.19
CSNK1D-223ENST00000584472 GOLGA6L10A0A0M3HER8 536 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 K7ERQ8 282 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 SMAD6O43541 496 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 ADH1BP00325 375 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 RBL1P28749 1068 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 CD6P30203 668 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 SNX1Q13596 522 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 OASLQ15646 514 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 INO80DQ53TQ3 878 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 DARS2Q6PI48 645 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 CACUL1Q86Y37 369 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 STK40Q8N2I9 435 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 FRMD1Q8N878 549 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 CASKIN2Q8WXE0 1202 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 PCED1AQ9H1Q7 454 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 PABPC3Q9H361 631 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 C10orf88Q9H8K7 445 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 CD93Q9NPY3 652 aa16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 UBA2Q9UBT2 640 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-223ENST00000584472 KCNK1O00180 336 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 PHF2O75151 1096 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 NDUFS2O75306 463 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 C5AR1P21730 350 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 HOXD12P35452 270 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 CKAP4Q07065 602 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 SLC10A7Q0GE19 358 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 HNRNPDQ14103 355 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 RFTN1Q14699 578 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 LBRQ14739 615 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 TMCO4Q5TGY1 634 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 ZNF572Q7Z3I7 529 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 MMAAQ8IVH4 418 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 PLPP6Q8IY26 295 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 TEX26Q8N6G2 289 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 OR2A12Q8NGT7 310 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 NSMCE1Q8WV22 266 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 HTR3CQ8WXA8 447 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 MAGOHBQ96A72 148 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 TOE1Q96GM8 510 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 WSB2Q9NYS7 404 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 FZD4Q9ULV1 537 aa16.2■□□□□ 0.18
CSNK1D-223ENST00000584472 TNRC6BQ9UPQ9 1833 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 CEP192Q8TEP8 1941 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 MED19A0JLT2 244 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 CCDC188H7C350 402 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 TM4SF5O14894 197 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 KCNN4O15554 427 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 MTSS1O43312 755 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 ZNF821O75541 412 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 ZNF189O75820 626 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 TMCC1O94876 653 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 ITGAVP06756 1048 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 CCNB1P14635 433 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 SLC8A1P32418 973 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 RECQLP46063 649 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 KCNJ1P48048 391 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 PSMD8P48556 350 aa16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 IFI35P80217 286 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-223ENST00000584472 CYTH1Q15438 398 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms