RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CHSY1Q86X52 802 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 TEX26Q8N6G2 289 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 PGM2Q96G03 612 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ZNF599Q96NL3 588 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 DUSP15Q9H1R2 295 aaPredicted RBP12.15□□□□□ -0.46
GGA3-217ENST00000583667 MAGEH1Q9H213 219 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ZFP14Q9HCL3 533 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 SAYSD1Q9NPB0 183 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 NDFIP2Q9NV92 336 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 MPP6Q9NZW5 540 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 AGO1Q9UL18 857 aaKnown RBP12.15□□□□□ -0.46
GGA3-217ENST00000583667 TBC1D30Q9Y2I9 924 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 TEX264Q9Y6I9 313 aa12.15□□□□□ -0.46
GGA3-217ENST00000583667 ASXL3Q9C0F0 2248 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CFAP46Q8IYW2 2715 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CCDC163A0A0D9SF12 145 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 SPAARA0A1B0GVQ0 90 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 E7EVH7 732 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 KCNK1O00180 336 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CNTN5O94779 1100 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 APRTP07741 180 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CCNB1P14635 433 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 TCF3P15923 654 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 WEE1P30291 646 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CORO1AP31146 461 aaKnown RBP12.14□□□□□ -0.47
GGA3-217ENST00000583667 MMP13P45452 471 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
GGA3-217ENST00000583667 RENBPP51606 427 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CREB5Q02930 508 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 IL10RBQ08334 325 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 PDIA2Q13087 525 aaKnown RBP12.14□□□□□ -0.47
GGA3-217ENST00000583667 CCDC38Q502W7 563 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 TNFAIP8L3Q5GJ75 292 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 FAM78AQ5JUQ0 283 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 DGKKQ5KSL6 1271 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 FNBP1LQ5T0N5 605 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 MPP7Q5T2T1 576 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 TMCO4Q5TGY1 634 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 KCTD11Q693B1 232 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 LRRC8BQ6P9F7 803 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 SETD3Q86TU7 594 aaPredicted RBP12.14□□□□□ -0.47
GGA3-217ENST00000583667 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CNPY4Q8N129 248 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CPXM2Q8N436 756 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CHCHD4Q8N4Q1 142 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 ATPAF2Q8N5M1 289 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CNTD1Q8N815 330 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 PWWP2AQ96N64 755 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 RPRD1AQ96P16 312 aaPredicted RBP12.14□□□□□ -0.47
GGA3-217ENST00000583667 SERPINB12Q96P63 405 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 FCRL5Q96RD9 977 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 GBA3Q9H227 469 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 LRRC4CQ9HCJ2 640 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 ASAH2Q9NR71 780 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 GKN1Q9NS71 199 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 IPO11Q9UI26 975 aaKnown RBP12.14□□□□□ -0.47
GGA3-217ENST00000583667 ARHGAP26Q9UNA1 814 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 RAI2Q9Y5P3 530 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 COL4A2P08572 1712 aa12.14□□□□□ -0.47
GGA3-217ENST00000583667 A0A087WUV0 522 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 CXorf51AA0A1B0GTR3 108 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 GOLGA6L7A0A1B0GV03 622 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 ILVBLA1L0T0 632 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 GOLGA6L10A6NI86 522 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 HMGB1P1B2RPK0 211 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 RASA4BC9J798 803 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 ZBTB24O43167 697 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 RASA4O43374 803 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 RAMP2O60895 175 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 AP2A1O95782 977 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 JCHAINP01591 159 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 HMBSP08397 361 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 MBL2P11226 248 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 CEBPBP17676 345 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 PSMC3P17980 439 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 SLC6A4P31645 630 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 CD68P34810 354 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 SIM1P81133 766 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 SERINC3Q13530 473 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 UAP1L1Q3KQV9 507 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 MSS51Q4VC12 460 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 DNAJC21Q5F1R6 531 aaKnown RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 CEP85LQ5SZL2 805 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 TXNDC8Q6A555 127 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 VITQ6UXI7 678 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 ZNF534Q76KX8 674 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 TDRPQ86YL5 185 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 LGI2Q8N0V4 545 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 ARL14EPQ8N8R7 260 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 ATP11CQ8NB49 1132 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 PYROXD1Q8WU10 500 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms