RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 PARP15Q460N3 678 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 INO80DQ53TQ3 878 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 GDPD4Q6W3E5 623 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 MDM1Q8TC05 714 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 RAB7BQ96AH8 199 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 GDAP1L1Q96MZ0 367 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 C1QTNF2Q9BXJ5 285 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 CCDC86Q9H6F5 360 aaKnown RBP21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 UCKL1Q9NWZ5 548 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 PCSK1NQ9UHG2 260 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 ACACAQ13085 2346 aa21.6■■□□□ 1.05
CSNK1D-221ENST00000582844 MYLKQ15746 1914 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 TRIM38O00635 465 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 NEMP1O14524 444 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 FGF10O15520 208 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 SPINT1O43278 529 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 SERPINC1P01008 464 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 GZMAP12544 262 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 DGKAP23743 735 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 ACADVLP49748 655 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 RHOAP61586 193 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 KLHL30Q0D2K2 578 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 SGCGQ13326 291 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 CAMK2BQ13554 666 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 CYTH1Q15438 398 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 TTC7BQ86TV6 843 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 CASKIN2Q8WXE0 1202 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 PEBP4Q96S96 227 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 KLF6Q99612 283 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 OSBPL1AQ9BXW6 950 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 DHX35Q9H5Z1 703 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 CNOT8Q9UFF9 292 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 AP4E1Q9UPM8 1137 aa21.59■■□□□ 1.05
CSNK1D-221ENST00000582844 APC2O95996 2303 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 SYCE3A1L190 88 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 TRABD2BA6NFA1 517 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 A6NNZ2 444 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 INSIG1O15503 277 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 SIGLEC6O43699 453 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 RFPL3O75679 317 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 C1SP09871 688 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 CKMT2P17540 419 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 ZNF542PQ5EBM4 170 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 LRRC73Q5JTD7 316 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 ERMARDQ5T6L9 678 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 PTAR1Q7Z6K3 402 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 TMPRSS12Q86WS5 348 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 FAM174AQ8TBP5 190 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 SNRNP25Q9BV90 132 aaKnown RBP21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 EDEM3Q9BZQ6 932 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 LRRC19Q9H756 370 aa21.58■■□□□ 1.05
CSNK1D-221ENST00000582844 FAM208BQ5VWN6 2430 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 J3KR12 359 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 AREL1O15033 823 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 IGSF6O95976 241 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 ITIH2P19823 946 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 HTR7P34969 479 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 RAD51Q06609 339 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 PROX2Q3B8N5 592 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 KDM7AQ6ZMT4 941 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 LUZP1Q86V48 1076 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 DCP2Q8IU60 420 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 CELF6Q96J87 481 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 EXOC2Q96KP1 924 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 LENG8Q96PV6 779 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 SLC39A8Q9C0K1 460 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 CBX8Q9HC52 389 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 GPR27Q9NS67 375 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 LHX3Q9UBR4 397 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 MFHAS1Q9Y4C4 1052 aa21.57■■□□□ 1.04
CSNK1D-221ENST00000582844 LAMA5O15230 3695 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 EEF2KO00418 725 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 FPGTO14772 594 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 FFAR2O15552 330 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 PIAS2O75928 621 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 RNF8O76064 485 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 TIMP2P16035 220 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 MIPP30301 263 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 NDST2P52849 883 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 ZNF211Q13398 564 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 KYAT3Q6YP21 454 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 CYP4V2Q6ZWL3 525 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 ZSCAN30Q86W11 494 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 ZNF653Q96CK0 615 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 ARHGEF26Q96DR7 871 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 KCTD15Q96SI1 283 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 PDFQ9HBH1 243 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 DNAJC28Q9NX36 388 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 MYO1AQ9UBC5 1043 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 UBA2Q9UBT2 640 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 LRRK1Q38SD2 2015 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 ZFYVE26Q68DK2 2539 aa21.56■■□□□ 1.04
CSNK1D-221ENST00000582844 CELSR3Q9NYQ7 3312 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 DAPK3O43293 454 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 GIMD1P0DJR0 217 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 CDK4P11802 303 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 JUPP14923 745 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 PAPOLAP51003 745 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 FANCCQ00597 558 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 CYP4F3Q08477 520 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms