RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 NLRC5Q86WI3 1866 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 FAM95CA0A1B0GW59 222 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.2
SRSF1-205ENST00000582730 A0A1W2PQY0 241 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 G3V2L1 256 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 NEMP1O14524 444 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 LYNP07948 512 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 SLC2A3P11169 496 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 PAMP19021 973 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 GABRB3P28472 473 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 SLC1A2P43004 574 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 SLC12A2P55011 1212 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 SLC10A7Q0GE19 358 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 DYNC1I2Q13409 638 aaKnown RBP13.83□□□□□ -0.2
SRSF1-205ENST00000582730 MARC1Q5VT66 337 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 TMPRSS6Q8IU80 811 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 GIPC2Q8TF65 315 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 PSMG2Q969U7 264 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 FUBP3Q96I24 572 aaKnown RBP eCLIP13.83□□□□□ -0.2
SRSF1-205ENST00000582730 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 SRRDQ9UH36 339 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 G3BP2Q9UN86 482 aaKnown RBP13.83□□□□□ -0.2
SRSF1-205ENST00000582730 SQORQ9Y6N5 450 aa13.83□□□□□ -0.2
SRSF1-205ENST00000582730 E9PBE3 544 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 CACNG3O60359 315 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 KLHL41O60662 606 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 TRPA1O75762 1119 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 DNAJB2P25686 324 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 HTR7P34969 479 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 CCR10P46092 362 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 DSC2Q02487 901 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 UGP2Q16851 508 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 RASIP1Q5U651 963 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 POTEHQ6S545 545 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 DBF4BQ8NFT6 615 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 ISL2Q96A47 359 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 GATA5Q9BWX5 397 aaPredicted RBP13.82□□□□□ -0.2
SRSF1-205ENST00000582730 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
SRSF1-205ENST00000582730 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 PTPRDP23468 1912 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 GOLGA8QA0A0J9YX86 632 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 LOC100653049A0A140TA62 436 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 GOLGA8OA6NCC3 632 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 GOLGA8NF8WBI6 632 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 CCL22O00626 93 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 SIN3BO75182 1162 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 KRT34O76011 436 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 CHRNGP07510 517 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
SRSF1-205ENST00000582730 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 LRRC8DQ7L1W4 858 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 CLEC14AQ86T13 490 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 ARHGAP18Q8N392 663 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 ATP6V0D2Q8N8Y2 350 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 TDRD5Q8NAT2 981 aaKnown RBP13.82□□□□□ -0.2
SRSF1-205ENST00000582730 C8orf48Q96LL4 319 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 NDNQ99608 321 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 SIKE1Q9BRV8 207 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 UBE2OQ9C0C9 1292 aaKnown RBP13.82□□□□□ -0.2
SRSF1-205ENST00000582730 MMADHCQ9H3L0 296 aaPredicted RBP13.82□□□□□ -0.2
SRSF1-205ENST00000582730 COG4Q9H9E3 785 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 ACOT9Q9Y305 439 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 PCDHB12Q9Y5F1 795 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
SRSF1-205ENST00000582730 STMN1P16949 149 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 RENBPP51606 427 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 CDK18Q07002 472 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 SLC12A1Q13621 1099 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 GSTA3Q16772 222 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 FBXL22Q6P050 247 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 CCNYL1Q8N7R7 359 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 IGSF8Q969P0 613 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 OMDQ99983 421 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 XPR1Q9UBH6 696 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 AURKAO14965 403 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 CIB2O75838 187 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 SLC35E2BP0CK96 405 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 MPSTP25325 297 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 RANBP1P43487 201 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 HARS2P49590 506 aaKnown RBP13.81□□□□□ -0.2
SRSF1-205ENST00000582730 NAGLUP54802 743 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 SLC25A3Q00325 362 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 CNPY1Q3B7I2 92 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 FAM91A1Q658Y4 838 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 SLC39A13Q96H72 371 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 NR1H4Q96RI1 486 aaPredicted RBP13.81□□□□□ -0.2
SRSF1-205ENST00000582730 TUBGCP5Q96RT8 1024 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 CYP4F11Q9HBI6 524 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 MID2Q9UJV3 735 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 MOXD2PA6NHM9 499 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 DCXO43602 365 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 RHOQP17081 205 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 ARNTP27540 789 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 GRIA4P48058 902 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 DUSP4Q13115 394 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 TUBB3Q13509 450 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 PEX6Q13608 980 aa13.81□□□□□ -0.2
SRSF1-205ENST00000582730 CEP97Q8IW35 865 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms