RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 ACVR2BQ13705 512 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 DOC2AQ14183 400 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ADIPOQQ15848 244 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SLC5A9Q2M3M2 681 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 CCDC57Q2TAC2 916 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 LETM2Q2VYF4 491 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ZNF260Q3ZCT1 412 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 CCDC14Q49A88 953 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 KHDC1Q4VXA5 237 aaKnown RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 ATAT1Q5SQI0 421 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 RBM20Q5T481 1227 aaKnown RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 SLC18B1Q6NT16 456 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ERICH5Q6P6B1 374 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ATF7IPQ6VMQ6 1270 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 PTCHD4Q6ZW05 846 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 OVCH2Q7RTZ1 564 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 COMTD1Q86VU5 262 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SESTD1Q86VW0 696 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 METTL23Q86XA0 190 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 PDSS2Q86YH6 399 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 C2CD5Q86YS7 1000 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ZDHHC17Q8IUH5 632 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 FAM71DQ8N9W8 422 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 CCDC26Q8TAB7 109 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ZUFSPQ96AP4 578 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 C19orf60Q96EN9 201 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 OSBPL9Q96SU4 736 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 TSG101Q99816 390 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SH2D3AQ9BRG2 576 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SIKE1Q9BRV8 207 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 THUMPD2Q9BTF0 503 aaKnown RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 ALG8Q9BVK2 526 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ACPTQ9BZG2 426 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SPRTNQ9H040 489 aaPredicted RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 LSG1Q9H089 658 aaKnown RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 GLT8D2Q9H1C3 349 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 CARD9Q9H257 536 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 MID1IP1Q9NPA3 183 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 PFDN4Q9NQP4 134 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 GLRX2Q9NS18 164 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 ZBTB40Q9NUA8 1239 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SPATS2LQ9NUQ6 558 aaKnown RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 ATAD3AQ9NVI7 634 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 MBD2Q9UBB5 411 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 PSME2Q9UL46 239 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SCAF8Q9UPN6 1271 aaKnown RBP4.16□□□□□ -1.74
SMG8-205ENST00000580798 SATB2Q9UPW6 733 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 STK38LQ9Y2H1 464 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 KLHL20Q9Y2M5 609 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 ATP8B3O60423 1300 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 CGNL1Q0VF96 1302 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 SPATA31A3Q5VYP0 1347 aa4.16□□□□□ -1.74
SMG8-205ENST00000580798 NINLQ9Y2I6 1382 aa4.15□□□□□ -1.74
SMG8-205ENST00000580798 MAGEB16A2A368 324 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 GOLGA6L4A6NEF3 574 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 OR6C65A6NJZ3 312 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 H3BML4 177 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 STX16-NPEPL1H3BU86 382 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 NDUFS8O00217 210 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 O00370 1275 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 VWA5AO00534 786 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 E2F3O00716 465 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 APOL1O14791 398 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 NVLO15381 856 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 CIDEAO60543 219 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TUSC2O75896 110 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 OLFM2O95897 454 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 IFNB1P01574 187 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 KRT14P02533 472 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 GNAI3P08754 354 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 NR2F1P10589 423 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 IFNAR1P17181 557 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 PDCP20941 246 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 NFKBIAP25963 317 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 PDIA3P30101 505 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 CCKARP32238 428 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 IDUAP35475 653 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 NUP62P37198 522 aaPredicted RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 ACAA2P42765 397 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 ALDH9A1P49189 494 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 CCNHP51946 323 aaPredicted RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 HADHBP55084 474 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 HDAC4P56524 1084 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 GNAI1P63096 354 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 RPP38P78345 283 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 MC1RQ01726 317 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 MAMLD1Q13495 774 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 BMPR2Q13873 1038 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 LASP1Q14847 261 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 POLD3Q15054 466 aaPredicted RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 TBCCQ15814 346 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TSTQ16762 297 aaKnown RBP4.15□□□□□ -1.75
SMG8-205ENST00000580798 TIGD6Q17RP2 521 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 FAM110CQ1W6H9 321 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 UAP1L1Q3KQV9 507 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 LRIT3Q3SXY7 679 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 SLC39A12Q504Y0 691 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 TCP11X2Q5H9J9 407 aa4.15□□□□□ -1.75
SMG8-205ENST00000580798 EMC10Q5UCC4 262 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms