RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PARP15Q460N3 678 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 INO80DQ53TQ3 878 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 GDPD4Q6W3E5 623 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 MDM1Q8TC05 714 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 RAB7BQ96AH8 199 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 GDAP1L1Q96MZ0 367 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 C1QTNF2Q9BXJ5 285 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 CCDC86Q9H6F5 360 aaKnown RBP21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 UCKL1Q9NWZ5 548 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 PCSK1NQ9UHG2 260 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 ACACAQ13085 2346 aa21.6■■□□□ 1.05
CSNK1D-215ENST00000580784 MYLKQ15746 1914 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 TRIM38O00635 465 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 NEMP1O14524 444 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 FGF10O15520 208 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 SPINT1O43278 529 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 SERPINC1P01008 464 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 GZMAP12544 262 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 DGKAP23743 735 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 ACADVLP49748 655 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 RHOAP61586 193 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 KLHL30Q0D2K2 578 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 SGCGQ13326 291 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 CAMK2BQ13554 666 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 CYTH1Q15438 398 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 TTC7BQ86TV6 843 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 CASKIN2Q8WXE0 1202 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 PEBP4Q96S96 227 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 KLF6Q99612 283 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 OSBPL1AQ9BXW6 950 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 DHX35Q9H5Z1 703 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 CNOT8Q9UFF9 292 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 AP4E1Q9UPM8 1137 aa21.59■■□□□ 1.05
CSNK1D-215ENST00000580784 APC2O95996 2303 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 SYCE3A1L190 88 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 TRABD2BA6NFA1 517 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 A6NNZ2 444 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 INSIG1O15503 277 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 SIGLEC6O43699 453 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 RFPL3O75679 317 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 C1SP09871 688 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 CKMT2P17540 419 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 ZNF542PQ5EBM4 170 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 LRRC73Q5JTD7 316 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 ERMARDQ5T6L9 678 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 PTAR1Q7Z6K3 402 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 TMPRSS12Q86WS5 348 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 FAM174AQ8TBP5 190 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 SNRNP25Q9BV90 132 aaKnown RBP21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 EDEM3Q9BZQ6 932 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 LRRC19Q9H756 370 aa21.58■■□□□ 1.05
CSNK1D-215ENST00000580784 FAM208BQ5VWN6 2430 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 J3KR12 359 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 AREL1O15033 823 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 IGSF6O95976 241 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 ITIH2P19823 946 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 HTR7P34969 479 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 RAD51Q06609 339 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 PROX2Q3B8N5 592 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 KDM7AQ6ZMT4 941 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 LUZP1Q86V48 1076 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 DCP2Q8IU60 420 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 CELF6Q96J87 481 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 EXOC2Q96KP1 924 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 LENG8Q96PV6 779 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 SLC39A8Q9C0K1 460 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 CBX8Q9HC52 389 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 GPR27Q9NS67 375 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 LHX3Q9UBR4 397 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 MFHAS1Q9Y4C4 1052 aa21.57■■□□□ 1.04
CSNK1D-215ENST00000580784 LAMA5O15230 3695 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 EEF2KO00418 725 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 FPGTO14772 594 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 FFAR2O15552 330 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 PIAS2O75928 621 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 RNF8O76064 485 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 TIMP2P16035 220 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 MIPP30301 263 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 NDST2P52849 883 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 ZNF211Q13398 564 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 KYAT3Q6YP21 454 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 CYP4V2Q6ZWL3 525 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 ZSCAN30Q86W11 494 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 ZNF653Q96CK0 615 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 ARHGEF26Q96DR7 871 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 KCTD15Q96SI1 283 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 PDFQ9HBH1 243 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 DNAJC28Q9NX36 388 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 MYO1AQ9UBC5 1043 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 UBA2Q9UBT2 640 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 LRRK1Q38SD2 2015 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 ZFYVE26Q68DK2 2539 aa21.56■■□□□ 1.04
CSNK1D-215ENST00000580784 CELSR3Q9NYQ7 3312 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 DAPK3O43293 454 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 GIMD1P0DJR0 217 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 CDK4P11802 303 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 JUPP14923 745 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 PAPOLAP51003 745 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 FANCCQ00597 558 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 CYP4F3Q08477 520 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms