RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 MAMLD1Q13495 774 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 FGL2Q14314 439 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 GRM3Q14832 879 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 ASIC2Q16515 512 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 PROX2Q3B8N5 592 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 PLEKHA7Q6IQ23 1121 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 GDPD4Q6W3E5 623 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 Q6ZSR6 202 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 PTAR1Q7Z6K3 402 aaPredicted RBP11.71□□□□□ -0.53
SSH2-208ENST00000579040 CACTIN-AS1Q8N1I8 211 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 OR6K2Q8NGY2 324 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 OR4C6Q8NH72 309 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 FNIP1Q8TF40 1166 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 HMCESQ96FZ2 354 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 EDEM3Q9BZQ6 932 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 TTYH3Q9C0H2 523 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 TAS2R14Q9NYV8 317 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 DKK3Q9UBP4 350 aa11.71□□□□□ -0.53
SSH2-208ENST00000579040 CACNA1GO43497 2377 aa11.71□□□□□ -0.54
SSH2-208ENST00000579040 SPTY2D1-AS1A0A0U1RR47 76 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 A0A1B0GTH6 734 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 FAM149AA5PLN7 773 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 NEMP2A6NFY4 417 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 FPGTO14772 594 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 AREL1O15033 823 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 SIGLEC6O43699 453 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 PAK4O96013 591 aaPredicted RBP11.7□□□□□ -0.54
SSH2-208ENST00000579040 ALPPL2P10696 532 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 JUPP14923 745 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 PSMA2P25787 234 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 GKP32189 559 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 ZNF165P49910 485 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 SUOXP51687 545 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 ZNF135P52742 658 aaPredicted RBP11.7□□□□□ -0.54
SSH2-208ENST00000579040 NDST2P52849 883 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■□□ 16.3
SSH2-208ENST00000579040 OGDHQ02218 1023 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 ATXN7L2Q5T6C5 722 aaPredicted RBP11.7□□□□□ -0.54
SSH2-208ENST00000579040 LEKR1Q6ZMV7 388 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 SLC22A18ASQ8N1D0 253 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 SLC25A45Q8N413 288 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 MDM1Q8TC05 714 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 RFFLQ8WZ73 363 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 VOPP1Q96AW1 172 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 NXPE2Q96DL1 559 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 BMFQ96LC9 184 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 KLHL32Q96NJ5 620 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 KLF6Q99612 283 aaPredicted RBP11.7□□□□□ -0.54
SSH2-208ENST00000579040 CPEB1Q9BZB8 566 aaKnown RBP11.7□□□□□ -0.54
SSH2-208ENST00000579040 KLC2Q9H0B6 622 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 NLGN3Q9NZ94 848 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 UBA2Q9UBT2 640 aaPredicted RBP11.7□□□□□ -0.54
SSH2-208ENST00000579040 AP4E1Q9UPM8 1137 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 ASXL3Q9C0F0 2248 aa11.7□□□□□ -0.54
SSH2-208ENST00000579040 POM121BA6NF01 834 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 TMEM191CA6NGB0 347 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 IGLON5A6NGN9 336 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 TMCO5BA8MYB1 307 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 H3BM21 787 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 TRIM38O00635 465 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 TOR1BO14657 336 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
SSH2-208ENST00000579040 RAD51BO15315 384 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 SPINT1O43278 529 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 RNF8O76064 485 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 NME1P15531 152 aaKnown RBP11.69□□□□□ -0.54
SSH2-208ENST00000579040 DAB2P98082 770 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 E2F1Q01094 437 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 KLHL30Q0D2K2 578 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 FZD2Q14332 565 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 ERMARDQ5T6L9 678 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 HES3Q5TGS1 186 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
SSH2-208ENST00000579040 TTC7BQ86TV6 843 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 PARGQ86W56 976 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 DNAAF5Q86Y56 855 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 MARCH9Q86YJ5 346 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 PSTKQ8IV42 348 aaKnown RBP11.69□□□□□ -0.54
SSH2-208ENST00000579040 HCAR2Q8TDS4 363 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 NCAPGQ9BPX3 1015 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 DUSP23Q9BVJ7 150 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 C1QTNF7Q9BXJ2 289 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 LRRC19Q9H756 370 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 USP29Q9HBJ7 922 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 UCKL1Q9NWZ5 548 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 DNAJC28Q9NX36 388 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 LHX3Q9UBR4 397 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 ITM2BQ9Y287 266 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 GPSM3Q9Y4H4 160 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 CSNK1G3Q9Y6M4 447 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 SCINQ9Y6U3 715 aa11.69□□□□□ -0.54
SSH2-208ENST00000579040 LRP4O75096 1905 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 ARHGAP42A6NI28 874 aa11.68□□□□□ -0.54
SSH2-208ENST00000579040 EEF2KO00418 725 aaKnown RBP11.68□□□□□ -0.54
SSH2-208ENST00000579040 SCAMP1O15126 338 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms