RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ZFHX2Q9C0A1 2572 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 MEI4A8MW99 385 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 SPINT1O43278 529 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 FSBPO95073 299 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 PRKCGP05129 697 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 HLA-DQB2P05538 268 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 MPLP40238 635 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 MMP13P45452 471 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 SEMG2Q02383 582 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 IHHQ14623 411 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 PPP2R5EQ16537 467 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 ZNF662Q6ZS27 426 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 SRLQ86TD4 932 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 CAMK1DQ8IU85 385 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 REXO1L1PQ8IX06 675 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 PLPP6Q8IY26 295 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 CCDC13Q8IYE1 715 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 MAML1Q92585 1016 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 FAM131CQ96AQ9 280 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 HES6Q96HZ4 224 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 PSKH2Q96QS6 385 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 OSBPL8Q9BZF1 889 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 FZD4Q9ULV1 537 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 SCML1Q9UN30 329 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 TTLL3Q9Y4R7 772 aa21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 EP300Q09472 2414 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP4-203ENST00000578516 TCRBV7S2A1N4TA0A589 114 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 POP4O95707 220 aaKnown RBP21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 IGHV4-34P06331 123 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 ITGB7P26010 798 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 SCNN1BP51168 640 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 DSC2Q02487 901 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 PPIDQ08752 370 aaKnown RBP21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 AP1B1Q10567 949 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 TFDP2Q14188 446 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 RFTN1Q14699 578 aaPredicted RBP21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 SF3A2Q15428 464 aaKnown RBP21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 GDPD4Q6W3E5 623 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 BBS12Q6ZW61 710 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 ERN2Q76MJ5 926 aaKnown RBP21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 C11orf74Q86VG3 221 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 KLK6Q92876 244 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 BIRC7Q96CA5 298 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 ZNF599Q96NL3 588 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 TSGA13Q96PP4 275 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 MGME1Q9BQP7 344 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 EBF2Q9HAK2 575 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 SGK2Q9HBY8 427 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 SEPT10Q9P0V9 454 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 PCDH15Q96QU1 1955 aa21.97■■□□□ 1.11
CDC42EP4-203ENST00000578516 BCLAF3A2AJT9 711 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 C16orf96A6NNT2 1141 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 PLRG1O43660 514 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 RETP07949 1114 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 CR2P20023 1033 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 TGM1P22735 817 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 MAT2AP31153 395 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 ZNF805Q5CZA5 627 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 MARC1Q5VT66 337 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 KIAA0895LQ68EN5 471 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 LAYNQ6UX15 382 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 ZC3H18Q86VM9 953 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 TEX26Q8N6G2 289 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 RUBCNQ92622 972 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 MIR1-1HGQ9H1L0 117 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 NOD2Q9HC29 1040 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 DYRK4Q9NR20 520 aa21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 RBM22Q9NW64 420 aaKnown RBP eCLIP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 EIF2B4Q9UI10 523 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 RIF1Q5UIP0 2472 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-203ENST00000578516 METTL12A8MUP2 240 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 MATN3O15232 486 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 JCHAINP01591 159 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 ADRB3P13945 408 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 ZFXP17010 805 aaPredicted RBP21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 MX2P20592 715 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 TGM2P21980 687 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 CCNCP24863 283 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 NEK3P51956 506 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 RGL4Q8IZJ4 473 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 ZCCHC9Q8N567 271 aaKnown RBP21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 UBL4BQ8N7F7 174 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 OR2T34Q8NGX1 318 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 ORAI3Q9BRQ5 295 aa21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.95■■□□□ 1.1
CDC42EP4-203ENST00000578516 MIF4GDA9UHW6 222 aaKnown RBP21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 C10orf142B7Z368 130 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 F5H423 210 aaPredicted RBP21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 CCNB1P14635 433 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 OTUD4Q01804 1114 aaKnown RBP21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 ITKQ08881 620 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 NIPAL4Q0D2K0 466 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 CCDC173Q0VFZ6 552 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 TRAF2Q12933 501 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 PDK1Q15118 436 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 PRKD1Q15139 912 aaPredicted RBP21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 PTPRRQ15256 657 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 MEI1Q5TIA1 1274 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 SEL1L3Q68CR1 1132 aa21.94■■□□□ 1.1
CDC42EP4-203ENST00000578516 TIGD7Q6NT04 549 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms