RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CCNJLQ8IV13 435 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 PHTF2Q8N3S3 785 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 SLC44A3Q8N4M1 653 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 MSANTD3Q96H12 275 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 FEM1CQ96JP0 617 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 TBL1YQ9BQ87 522 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 NAT9Q9BTE0 207 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 C8orf33Q9H7E9 229 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-202ENST00000578430 KCNK12Q9HB15 430 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 ARNT2Q9HBZ2 717 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 SAYSD1Q9NPB0 183 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 GTSE1Q9NYZ3 720 aa13.59□□□□□ -0.23
SRSF1-202ENST00000578430 SDR42E2A6NKP2 422 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 F5H423 210 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 NPC1O15118 1278 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PMPCBO75439 489 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 MT-CYBP00156 380 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 APODP05090 189 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 SP100P23497 879 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PLA2G5P39877 138 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 MAGEA4P43358 317 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 SCNN1BP51168 640 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PFKPQ01813 784 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 RAD51Q06609 339 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PDIA2Q13087 525 aaKnown RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 BBS9Q3SYG4 887 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 CCDC38Q502W7 563 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 FNBP1LQ5T0N5 605 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 FAM182AQ5T1J6 154 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 CFAP58Q5T655 872 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 C22orf39Q6P5X5 142 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 RANBP10Q6VN20 620 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 ZNF534Q76KX8 674 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 ST13P5Q8NFI4 369 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 IPMKQ8NFU5 416 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 IFT43Q96FT9 208 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 TUBGCP5Q96RT8 1024 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 CIPCQ9C0C6 399 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 VIPAS39Q9H9C1 493 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 UBP1Q9NZI7 540 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 BFARQ9NZS9 450 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 LIMD1Q9UGP4 676 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 PLA2G4CQ9UP65 541 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 FCF1Q9Y324 198 aaKnown RBP13.58□□□□□ -0.24
SRSF1-202ENST00000578430 ACTL7AQ9Y615 435 aa13.58□□□□□ -0.24
SRSF1-202ENST00000578430 KIAA1549LQ6ZVL6 1849 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 LOC285095A0A1B0GVY8 99 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 A0A1W2PQ67 120 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 MAGEB16A2A368 324 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 TBC1D3BA6NDS4 549 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 K7ERQ8 282 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 TRIM24O15164 1050 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 SMAD6O43541 496 aaKnown RBP13.57□□□□□ -0.24
SRSF1-202ENST00000578430 SOCS5O75159 536 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 SPAG6O75602 509 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 KAT7O95251 611 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 TTC4O95801 387 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 GSTA2P09210 222 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 HLA-DPA1P20036 260 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 TNFRSF4P43489 277 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 RECQLP46063 649 aaPredicted RBP13.57□□□□□ -0.24
SRSF1-202ENST00000578430 RGRP47804 291 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 NUMBP49757 651 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 CDK18Q07002 472 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 CASP8Q14790 479 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 DLG2Q15700 870 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 CARD16Q5EG05 197 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 RALGPS2Q86X27 583 aaPredicted RBP13.57□□□□□ -0.24
SRSF1-202ENST00000578430 ZBED8Q8IZ13 594 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 OR52K1Q8NGK4 314 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 PYROXD1Q8WU10 500 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 MRGPRX3Q96LB0 322 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 PWWP2AQ96N64 755 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 FICDQ9BVA6 458 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 CPEB1Q9BZB8 566 aaKnown RBP13.57□□□□□ -0.24
SRSF1-202ENST00000578430 IL22Q9GZX6 179 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 CDC42EP4Q9H3Q1 356 aaKnown RBP13.57□□□□□ -0.24
SRSF1-202ENST00000578430 TEX264Q9Y6I9 313 aa13.57□□□□□ -0.24
SRSF1-202ENST00000578430 COL4A3Q01955 1670 aa13.56□□□□□ -0.24
SRSF1-202ENST00000578430 LOC730098B7Z3J9 87 aa13.56□□□□□ -0.24
SRSF1-202ENST00000578430 WASH3PC4AMC7 463 aa13.56□□□□□ -0.24
SRSF1-202ENST00000578430 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
SRSF1-202ENST00000578430 ZNF821O75541 412 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-202ENST00000578430 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
SRSF1-202ENST00000578430 NDST3O95803 873 aa13.56□□□□□ -0.24
SRSF1-202ENST00000578430 CPP00450 1065 aa13.56□□□□□ -0.24
SRSF1-202ENST00000578430 AGTP01019 485 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms