RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 IRAK2O43187 625 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 B4GALT5O43286 388 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PSMD10O75832 226 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CCNB2O95067 398 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ITIH2P19823 946 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 DRD1P21728 446 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 COMTP21964 271 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 AMPD1P23109 780 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 RPL3P39023 403 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CD151P48509 253 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PSMD4P55036 377 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CDH4P55283 916 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 AP1S1P61966 158 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 VSNL1P62760 191 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 LMAN2Q12907 356 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ABRQ12979 859 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 DLG2Q15700 870 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NAB2Q15742 525 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 KBTBD12Q3ZCT8 623 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNT1Q5JUK3 1230 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ATXN7L2Q5T6C5 722 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PLEKHM3Q6ZWE6 761 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 KRT73Q86Y46 540 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM126BQ8IUX1 230 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ARID3BQ8IVW6 561 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 DEPDC4Q8N2C3 294 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 DPP10Q8N608 796 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 IL31RAQ8NI17 732 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ANKRD49Q8WVL7 239 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 IRGQQ8WZA9 623 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NCSTNQ92542 709 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM162AQ96A26 154 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 VCPIP1Q96JH7 1222 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 FCRL2Q96LA5 508 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ECSITQ9BQ95 431 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 AIF1LQ9BQI0 150 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 C17orf80Q9BSJ5 609 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 WRAP53Q9BUR4 548 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 THUMPD3Q9BV44 507 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 RAB11FIP5Q9BXF6 653 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ZCWPW1Q9H0M4 648 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 COMMD8Q9NX08 183 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 OPTCQ9UBM4 332 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 EVLQ9UI08 416 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF112Q9UJU3 913 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ANKRD6Q9Y2G4 727 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SIK3Q9Y2K2 1263 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NEU2Q9Y3R4 380 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TNPO3Q9Y5L0 923 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A096LPK6 155 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TTC26A0AVF1 554 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 DYTNA2CJ06 578 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SOWAHDA6NJG2 315 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TRPC5OSA6NMA1 111 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 A8MUI8 341 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 HEPACAM2A8MVW5 462 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC28A1O00337 649 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PEX10O60683 326 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MAP3K6O95382 1288 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RHOP08100 348 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KITP10721 976 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CTPS1P17812 591 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ITGB5P18084 799 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GRIA2P42262 883 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MLLT3P42568 568 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC11A1P49279 550 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC5A3P53794 718 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NRG3P56975 720 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FOXK1P85037 733 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ECT2LQ008S8 904 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TRIM32Q13049 653 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ITGADQ13349 1161 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TDGQ13569 410 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FLOT2Q14254 428 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 INPP5AQ14642 412 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SHROOM1Q2M3G4 852 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PGS1Q32NB8 556 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SHC4Q6S5L8 630 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SH3BP5LQ7L8J4 393 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MILR1Q7Z6M3 343 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 HORMAD1Q86X24 394 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CFAP52Q8N1V2 620 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CASKIN2Q8WXE0 1202 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KCTD13Q8WZ19 329 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHL6Q8WZ60 621 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SHC3Q92529 594 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TATDN2Q93075 761 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RBM15Q96T37 977 aaKnown RBP eCLIP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SH3GL1Q99961 368 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TBL1YQ9BQ87 522 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TAPBPLQ9BX59 468 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 EIF2AQ9BY44 585 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PITPNM3Q9BZ71 974 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TTYH3Q9C0H2 523 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ROGDIQ9GZN7 287 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ADAM7Q9H2U9 754 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ELAC1Q9H777 363 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SMYD3Q9H7B4 428 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FBRSQ9HAH7 460 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NMRAL1Q9HBL8 299 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms