RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 KRT85P78386 507 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ARF5P84085 180 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 PPARDQ03181 441 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 LRRC63Q05C16 580 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 EIF3IQ13347 325 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 LRRC73Q5JTD7 316 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ARTNQ5T4W7 220 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 OTUD1Q5VV17 481 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 GJB7Q6PEY0 223 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 RD3Q7Z3Z2 195 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 PASD1Q8IV76 773 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 RYBPQ8N488 228 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 Q8N9G6 341 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 HTR3CQ8WXA8 447 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ASB12Q8WXK4 309 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 TSACCQ96A04 125 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 CPEB1Q9BZB8 566 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 TM6SF2Q9BZW4 377 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 STRADBQ9C0K7 418 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 SLC25A18Q9H1K4 315 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 LRRN3Q9H3W5 708 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ZDHHC6Q9H6R6 413 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ASNSD1Q9NWL6 643 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 RMND1Q9NWS8 449 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ARHGEF38Q9NXL2 777 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ACSL6Q9UKU0 697 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 LOXL2Q9Y4K0 774 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 FLNCQ14315 2725 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 UNC13CQ8NB66 2214 aa10.27□□□□□ -0.76
NPLOC4-220ENST00000576940 TMX2-CTNND1H3BSU7 103 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 NVLO15381 856 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 ERBB2P04626 1255 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 SFTPCP11686 197 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 IGFALSP35858 605 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 USP8P40818 1118 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 CXCR3P49682 368 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 YPEL5P62699 121 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 SLC6A3Q01959 620 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 SLC20A2Q08357 652 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 IGFBP7Q16270 282 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 MEA1Q16626 185 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 SKIDA1Q1XH10 827 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 RETSATQ6NUM9 610 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 OLFML1Q6UWY5 402 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 LRRC31Q6UY01 552 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 C11orf57Q6ZUT1 292 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 TTC7BQ86TV6 843 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 HID1Q8IV36 788 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 PCDH20Q8N6Y1 951 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 ARL10Q8N8L6 244 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 KYQ8NBH2 561 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 DENND6BQ8NEG7 585 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 PCDH19Q8TAB3 1148 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 JPH3Q8WXH2 748 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 USP7Q93009 1102 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 VOPP1Q96AW1 172 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 CEP44Q9C0F1 390 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 INTS2Q9H0H0 1204 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 ATP13A1Q9HD20 1204 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 FOXJ2Q9P0K8 574 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 SEPT10Q9P0V9 454 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
NPLOC4-220ENST00000576940 FAM170AA1A519 330 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ILVBLA1L0T0 632 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 BECN2A8MW95 431 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 C9orf172C9J069 976 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 D6RAR5 112 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 PPFIA2O75334 1257 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 CTSEP14091 401 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 CCKBRP32239 447 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ACVRL1P37023 503 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 SULT1E1P49888 294 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 HK3P52790 923 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 MAPK10P53779 464 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 APBA1Q02410 837 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 MTA1Q13330 715 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ARHGAP44Q17R89 818 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ZNF805Q5CZA5 627 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ENPP7Q6UWV6 458 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 DTX1Q86Y01 620 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 SFTPA2Q8IWL1 248 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 ZSCAN1Q8NBB4 408 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 C1orf131Q8NDD1 294 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 RAB7BQ96AH8 199 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 C1orf74Q96LT6 269 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 TBATAQ96M53 351 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 KLHL32Q96NJ5 620 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 TMEM74Q96NL1 305 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 GSDMAQ96QA5 445 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 NPY6RQ99463 290 aa10.26□□□□□ -0.77
NPLOC4-220ENST00000576940 EDEM3Q9BZQ6 932 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms