RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 NOBOXO60393 691 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 ZNF202O95125 648 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 CCKBRP32239 447 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 SERPINH1P50454 418 aaKnown RBP12.13□□□□□ -0.47
CTNS-208ENST00000574218 MAPK10P53779 464 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 CCL7P80098 99 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
CTNS-208ENST00000574218 C5orf22Q49AR2 442 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 ALFQ53S48 1182 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 BRMS1LQ5PSV4 323 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 TPRG1LQ5T0D9 272 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 ACBD5Q5T8D3 534 aaPredicted RBP12.13□□□□□ -0.47
CTNS-208ENST00000574218 TMEM164Q5U3C3 297 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 ZNF783Q6ZMS7 281 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 C11orf57Q6ZUT1 292 aaPredicted RBP12.13□□□□□ -0.47
CTNS-208ENST00000574218 KYQ8NBH2 561 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 ATL2Q8NHH9 583 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 CXorf40AQ8TE69 158 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 CMKLR1Q99788 373 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 TKTL2Q9H0I9 626 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 ADNPQ9H2P0 1102 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 LRRN3Q9H3W5 708 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
CTNS-208ENST00000574218 RRN3Q9NYV6 651 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 HECAQ9UBI9 543 aaPredicted RBP12.13□□□□□ -0.47
CTNS-208ENST00000574218 STAP1Q9ULZ2 295 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 GPR34Q9UPC5 381 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 C16orf96A6NNT2 1141 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 RNF103O00237 685 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 AGRPO00253 132 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 DAB1O75553 588 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 TM7SF2O76062 418 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 SMC2O95347 1197 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 CD82P27701 267 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 HTR1BP28222 390 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 IGFALSP35858 605 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 EIF4A3P38919 411 aaKnown RBP12.12□□□□□ -0.47
CTNS-208ENST00000574218 USP8P40818 1118 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 PNOCQ13519 176 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 POLD3Q15054 466 aaPredicted RBP12.12□□□□□ -0.47
CTNS-208ENST00000574218 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 PTRH1Q86Y79 214 aaKnown RBP12.12□□□□□ -0.47
CTNS-208ENST00000574218 CCNJLQ8IV13 435 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 HID1Q8IV36 788 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 OR7D4Q8NG98 312 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 PCDH19Q8TAB3 1148 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 ZNF564Q8TBZ8 553 aaPredicted RBP12.12□□□□□ -0.47
CTNS-208ENST00000574218 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 EDEM3Q9BZQ6 932 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 TM6SF2Q9BZW4 377 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 CLPBQ9H078 707 aa12.12□□□□□ -0.47
CTNS-208ENST00000574218 UBE2TQ9NPD8 197 aaPredicted RBP12.12□□□□□ -0.47
CTNS-208ENST00000574218 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
CTNS-208ENST00000574218 PRAMEF33A0A0G2JMD5 474 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 A0A1W2PQC6 194 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ILVBLA1L0T0 632 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 TMEM110-MUSTN1A8MSY1 372 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 KRIT1O00522 736 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 CASC3O15234 703 aaKnown RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 PRAMEF10O60809 474 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 RASGRP1O95267 797 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ITIH1P19827 911 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ABL2P42684 1182 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 SULT1E1P49888 294 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 PMS1P54277 932 aaKnown RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 GEMIN4P57678 1058 aaKnown RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 DEUP1Q05D60 604 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 MORC3Q14149 939 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 TCEA2Q15560 299 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ZNF805Q5CZA5 627 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 PHF19Q5T6S3 580 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 BORAQ6PGQ7 559 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ENOSF1Q7L5Y1 443 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 RD3Q7Z3Z2 195 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ZFAND4Q86XD8 727 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 Q8N9G6 341 aaPredicted RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 USP7Q93009 1102 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 SMARCE1Q969G3 411 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 FAM81BQ96LP2 452 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 TMEM51Q9NW97 253 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 MPP6Q9NZW5 540 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 ITM2BQ9Y287 266 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
CTNS-208ENST00000574218 NBASA2RRP1 2371 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
CTNS-208ENST00000574218 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms