RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 DUSP3P51452 185 aaPredicted RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 HDAC4P56524 1084 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 PCBP4P57723 403 aaKnown RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 CXADRP78310 365 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 CDR2Q01850 454 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 C1QBPQ07021 282 aaKnown RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 PTP4A2Q12974 167 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 CDKN3Q16667 212 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 DEFB133Q30KQ1 61 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 RWDD4Q6NW29 188 aaKnown RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 ZNF677Q86XU0 584 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 RBFAQ8N0V3 343 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 RYBPQ8N488 228 aaPredicted RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 LSM14AQ8ND56 463 aaKnown RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 SLC30A5Q8TAD4 765 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 MAPK15Q8TD08 544 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 CENPIQ92674 756 aaPredicted RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 NAF1Q96HR8 494 aaKnown RBP22.32■■□□□ 1.16
SNF8-216ENST00000573795 LGMNQ99538 433 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 C11orf70Q9BRQ4 267 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 POLR1BQ9H9Y6 1135 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 TAB2Q9NYJ8 693 aa22.32■■□□□ 1.16
SNF8-216ENST00000573795 ZNF462Q96JM2 2506 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 H3BM21 787 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 EPHB6O15197 1021 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 CASC3O15234 703 aaKnown RBP22.31■■□□□ 1.16
SNF8-216ENST00000573795 GFPT2O94808 682 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 JUNDP17535 347 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 SDC4P31431 198 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 IGFALSP35858 605 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 PTPN9P43378 593 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 JAM2P57087 298 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 C19orf57Q0VDD7 668 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 SGCGQ13326 291 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 ISXQ2M1V0 245 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 LRRC73Q5JTD7 316 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 ATXN7L2Q5T6C5 722 aaPredicted RBP22.31■■□□□ 1.16
SNF8-216ENST00000573795 STRADAQ7RTN6 431 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 LMX1AQ8TE12 382 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 CENPTQ96BT3 561 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 KLHL32Q96NJ5 620 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 MAGEH1Q9H213 219 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 RETREG1Q9H6L5 497 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 NOL6Q9H6R4 1146 aaKnown RBP22.31■■□□□ 1.16
SNF8-216ENST00000573795 KIF26BQ2KJY2 2108 aa22.31■■□□□ 1.16
SNF8-216ENST00000573795 EME2A4GXA9 379 aaPredicted RBP22.3■■□□□ 1.16
SNF8-216ENST00000573795 KRIT1O00522 736 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 GCATO75600 419 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 EEF1GP26641 437 aaKnown RBP22.3■■□□□ 1.16
SNF8-216ENST00000573795 MYLK3Q32MK0 819 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 ARL13BQ3SXY8 428 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 EFL1Q7Z2Z2 1120 aaKnown RBP22.3■■□□□ 1.16
SNF8-216ENST00000573795 LSMEM2Q8N112 164 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 TBC1D31Q96DN5 1066 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 ABCG4Q9H172 646 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 IPO11Q9UI26 975 aaKnown RBP22.3■■□□□ 1.16
SNF8-216ENST00000573795 SALL4Q9UJQ4 1053 aa22.3■■□□□ 1.16
SNF8-216ENST00000573795 RAMP2O60895 175 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 PLEKP08567 350 aaPredicted RBP22.29■■□□□ 1.16
SNF8-216ENST00000573795 ITIH2P19823 946 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 GEMIN4P57678 1058 aaKnown RBP22.29■■□□□ 1.16
SNF8-216ENST00000573795 ERVPABLB-1P60509 514 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 SNRPD1P62314 119 aaKnown RBP22.29■■□□□ 1.16
SNF8-216ENST00000573795 POLD3Q15054 466 aaPredicted RBP22.29■■□□□ 1.16
SNF8-216ENST00000573795 PERM1Q5SV97 790 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 NETO2Q8NC67 525 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 FAM172AQ8WUF8 416 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 PCDHB18PQ96TA0 734 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 LRRC61Q9BV99 259 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 BOCQ9BWV1 1114 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 OSBPL1AQ9BXW6 950 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 KLC2Q9H0B6 622 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 EVA1BQ9NVM1 165 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 DACH1Q9UI36 760 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 LRP4O75096 1905 aa22.29■■□□□ 1.16
SNF8-216ENST00000573795 CPED1A4D0V7 1026 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 NEMP1O14524 444 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 TPP1O14773 563 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 KDELR3O43731 214 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 TMCC1O94876 653 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 ZIC2O95409 532 aaPredicted RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 POP4O95707 220 aaKnown RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 UNGP13051 313 aaPredicted RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 GSCP56915 257 aaPredicted RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 IGF2-ASQ6U949 168 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 CRTC1Q6UUV9 634 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 GDPD4Q6W3E5 623 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 SLC35F3Q8IY50 421 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 PYROXD2Q8N2H3 581 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 ZNF843Q8N446 348 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 TP53I13Q8NBR0 393 aaPredicted RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 NTAN1Q96AB6 310 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 PRR11Q96HE9 360 aaPredicted RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 CPNE5Q9HCH3 593 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 MBNL1Q9NR56 388 aaKnown RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 APOBEC3BQ9UH17 382 aaKnown RBP22.28■■□□□ 1.16
SNF8-216ENST00000573795 SATB2Q9UPW6 733 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 ENTPD2Q9Y5L3 495 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 TENM4Q6N022 2769 aa22.28■■□□□ 1.16
SNF8-216ENST00000573795 ASH1LQ9NR48 2969 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms