RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 ISG20Q96AZ6 181 aaKnown RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 CRELD1Q96HD1 420 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 ZNF419Q96HQ0 510 aaPredicted RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 GDAP1L1Q96MZ0 367 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 CSPG4P5Q96PW8 444 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 MAK16Q9BXY0 300 aaKnown RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 SLC39A8Q9C0K1 460 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 KLC2Q9H0B6 622 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 NOL6Q9H6R4 1146 aaKnown RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 HECAQ9UBI9 543 aaPredicted RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 SARDHQ9UL12 918 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 RAXQ9Y2V3 346 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 ANKRD36A6QL64 1941 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 NBPF19A0A087WUL8 3843 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CXorf51AA0A1B0GTR3 108 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 FAM221BA6H8Z2 402 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 METTL12A8MUP2 240 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 PATE3B3GLJ2 98 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 PYCARD-AS1I3L0S3 204 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 J3KR12 359 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 NRDCO43847 1150 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 PRAMEF11O60813 436 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 LEFTY1O75610 366 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 MTA2O94776 668 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 LCA5LO95447 670 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 POP4O95707 220 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 GSRP00390 522 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 KRT1P04264 644 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CSRP1P21291 193 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 XPAP23025 273 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 SLC1A1P43005 524 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CNTN1Q12860 1018 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 DPYSQ14117 519 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 DPYSL3Q14195 570 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 INO80DQ53TQ3 878 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 ANKRD20A8PQ5CZ79 823 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CFAP58Q5T655 872 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 ATXN7L2Q5T6C5 722 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 KIAA0895LQ68EN5 471 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 TCEAL6Q6IPX3 200 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 FBXL19Q6PCT2 694 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 NCEH1Q6PIU2 408 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 ADAT2Q7Z6V5 191 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 DAAM2Q86T65 1068 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CPNE8Q86YQ8 564 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 RHOT1Q8IXI2 618 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 BBS5Q8N3I7 341 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 ZCCHC9Q8N567 271 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 ATPAF2Q8N5M1 289 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 NPWQ8N729 165 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 OR2T34Q8NGX1 318 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 OR6K2Q8NGY2 324 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 TCEAL3Q969E4 200 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 ZNF830Q96NB3 372 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 EDEM2Q9BV94 578 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CINPQ9BW66 212 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 GTPBP2Q9BX10 602 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 PCED1AQ9H1Q7 454 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 CCDC86Q9H6F5 360 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 C6orf106Q9H6K1 298 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 LRRC19Q9H756 370 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 TMEM74BQ9NUR3 256 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 DDX56Q9NY93 547 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 RCOR3Q9P2K3 495 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 SERGEFQ9UGK8 458 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 EVLQ9UI08 416 aaPredicted RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 EIF2B4Q9UI10 523 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 IPO11Q9UI26 975 aaKnown RBP7.9□□□□□ -1.14
SMG6-211ENST00000572369 PILRBQ9UKJ0 227 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 PPM1HQ9ULR3 514 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 SLC6A14Q9UN76 642 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 TFR2Q9UP52 801 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 HYOU1Q9Y4L1 999 aa7.9□□□□□ -1.14
SMG6-211ENST00000572369 PLXNA2O75051 1894 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 SDK1Q7Z5N4 2213 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 ASXL3Q9C0F0 2248 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 A0A1B0GTW7 788 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 CAPN8A6NHC0 703 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 NEMP1O14524 444 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 SLC7A4O43246 635 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 PCDH8O95206 1070 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 WISP1O95388 367 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 CD160O95971 181 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 UGT2B4P06133 528 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 CTSLP07711 333 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 SYPP08247 313 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 CD48P09326 243 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 COMTP21964 271 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 KDELR1P24390 212 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 MAT2AP31153 395 aaKnown RBP7.89□□□□□ -1.15
SMG6-211ENST00000572369 GKP32189 559 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 HOXD12P35452 270 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 DRD3P35462 400 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 MAPK8P45983 427 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 RENBPP51606 427 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 NEK3P51956 506 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 VAV2P52735 878 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 METAP1P53582 386 aa7.89□□□□□ -1.15
SMG6-211ENST00000572369 ADPRHP54922 357 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms