RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 HUS1O60921 280 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 CD4P01730 458 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 C8BP07358 591 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 NELFEP18615 380 aaKnown RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 HDCP19113 662 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 FGFR3P22607 806 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 SCAPQ12770 1279 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 IKBKEQ14164 716 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 EML3Q32P44 896 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 LIMS2Q7Z4I7 341 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 ALDH16A1Q8IZ83 802 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 TSPAN14Q8NG11 270 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 KCTD13Q8WZ19 329 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 ZNF597Q96LX8 424 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 SUCOQ9UBS9 1254 aaKnown RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 hCG_2014768A0A024R1R8 64 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 FAM95CA0A1B0GW59 222 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 NEMP2A6NFY4 417 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 NPHS1O60500 1241 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 TRMUO75648 421 aaKnown RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 HCAR3P49019 387 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 MAP3K7CLP57077 242 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 TXNL4AP83876 142 aaKnown RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 RALGDSQ12967 914 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 MYBPC3Q14896 1274 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 ADRM1Q16186 407 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 NOTUMQ6P988 496 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 TRIM67Q6ZTA4 783 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 SPNS2Q8IVW8 549 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 SPATA22Q8NHS9 363 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 CELF6Q96J87 481 aaKnown RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 ZNF512Q96ME7 567 aaPredicted RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 ULBP1Q9BZM6 244 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 BRD8Q9H0E9 1235 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 OSBPL2Q9H1P3 480 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 MRPL46Q9H2W6 279 aaKnown RBP17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 POMKQ9H5K3 350 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
PCDHB19P-201ENST00000570871 ARHGEF37A1IGU5 675 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 FBP2O00757 339 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 STMN1P16949 149 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 PSMD8P48556 350 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 POU6F1Q14863 301 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 KLC3Q6P597 504 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 NUP93Q8N1F7 819 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 GRIN3AQ8TCU5 1115 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 LPGAT1Q92604 370 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 SLCO4A1Q96BD0 722 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 VAT1Q99536 393 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 OSMRQ99650 979 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 CCT7Q99832 543 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 UNC93B1Q9H1C4 597 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 TIMMDC1Q9NPL8 285 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 DDIT4Q9NX09 232 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 DNAH12Q6ZR08 3092 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 ADCYAP1R1P41586 468 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 AIF1P55008 147 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 RHDQ02161 417 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 SULT2A1Q06520 285 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 LRP8Q14114 963 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 PKN3Q6P5Z2 889 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 CHSY3Q70JA7 882 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 SPPL2BQ8TCT7 592 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 PPP1R13LQ8WUF5 828 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 HEXDCQ8WVB3 486 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 BRI3BPQ8WY22 251 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 DPF3Q92784 378 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 TMIGD2Q96BF3 282 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 SLC29A1Q99808 456 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 TRPV6Q9H1D0 765 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 CACNA2D2Q9NY47 1150 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 LMCD1Q9NZU5 365 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 SNX13Q9Y5W8 968 aa17.06■□□□□ 0.32
PCDHB19P-201ENST00000570871 NRCAMQ92823 1304 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 H0YJX3 145 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 TRIM24O15164 1050 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 ZNF23P17027 643 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 DNAJB1P25685 340 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 PNPLA4P41247 253 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 LILRA4P59901 499 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 PRPSAP1Q14558 356 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 UGP2Q16851 508 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 SV2CQ496J9 727 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 MTX3Q5HYI7 312 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 PCID2Q5JVF3 399 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 REP15Q6BDI9 236 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 ZNF280DQ6N043 979 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 ESRP1Q6NXG1 681 aaKnown RBP17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 PIWIL4Q7Z3Z4 852 aaKnown RBP17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 LINC00523Q86TU6 105 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 CARM1Q86X55 608 aa17.05■□□□□ 0.32
PCDHB19P-201ENST00000570871 CNTN4Q8IWV2 1026 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms