RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CARD9	Q9H257	536 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	WSB2	Q9NYS7	404 aa	Predicted RBP	11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SEPT10	Q9P0V9	454 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RAB23	Q9ULC3	237 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	FZD4	Q9ULV1	537 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	JRKL	Q9Y4A0	524 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PCDH15	Q96QU1	1955 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PLXNB3	Q9ULL4	1909 aa		11.72	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TTC24	A2A3L6	582 aa	Predicted RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845		H7C0C1	242 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	GJB3	O75712	270 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PIGN	O95427	931 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ITGB7	P26010	798 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ACSL1	P33121	698 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ATP5O	P48047	213 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SCNN1B	P51168	640 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MAX	P61244	160 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	IFI35	P80217	286 aa	Predicted RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RPL6	Q02878	288 aa	Known RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ITK	Q08881	620 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ZBTB17	Q13105	803 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	GRM3	Q14832	879 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PRKD1	Q15139	912 aa	Predicted RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ELF2	Q15723	593 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PLK5	Q496M5	336 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ZNF805	Q5CZA5	627 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	PMS2CL	Q68D20	193 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	GDPD4	Q6W3E5	623 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	LPCAT2	Q7L5N7	544 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TMEFF1	Q8IYR6	380 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	DEFB119	Q8N690	84 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ACTL9	Q8TC94	416 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ZC3H10	Q96K80	434 aa	Known RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	KLHL32	Q96NJ5	620 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NUDCD1	Q96RS6	583 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TUBGCP5	Q96RT8	1024 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	FAM118B	Q9BPY3	351 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	MGME1	Q9BQP7	344 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	GPR174	Q9BXC1	333 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	CPEB1	Q9BZB8	566 aa	Known RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	BTBD1	Q9H0C5	482 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	NEUROG2	Q9H2A3	272 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SEMA4A	Q9H3S1	761 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	ATP13A3	Q9H7F0	1226 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SCUBE2	Q9NQ36	999 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	HAUS2	Q9NVX0	235 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	SMG5	Q9UPR3	1016 aa	Known RBP	11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	TTLL3	Q9Y4R7	772 aa		11.71	□□□□□ -0.53
ATP2A3-208	ENST00000570845	RIF1	Q5UIP0	2472 aa	Known RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	TCRBV7S2A1N4T	A0A589	114 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	FAM47DP	A6NHR8	397 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	HACD1	B0YJ81	288 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	RHOBTB1	O94844	696 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	SEMA4F	O95754	770 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	JCHAIN	P01591	159 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	HLA-DQB2	P05538	268 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	CR2	P20023	1033 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	SERPINA4	P29622	427 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	CXCR5	P32302	372 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	MAPK8	P45983	427 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	DHPS	P49366	369 aa	Predicted RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	NEK3	P51956	506 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	EIF3E	P60228	445 aa	Known RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	AP1S1	P61966	158 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	BCL2L1	Q07817	233 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	KLF1	Q13351	362 aa	Predicted RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	XRCC4	Q13426	336 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	SLC45A4	Q5BKX6	768 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	AGBL4	Q5VU57	503 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	FBXL19	Q6PCT2	694 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	ERN2	Q76MJ5	926 aa	Known RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	PARS2	Q7L3T8	475 aa	Known RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	ARMCX6	Q7L4S7	300 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	ADAT2	Q7Z6V5	191 aa	Known RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	TTC13	Q8NBP0	860 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	OR14C36	Q8NHC7	312 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	NKD2	Q969F2	451 aa	Predicted RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	VOPP1	Q96AW1	172 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	IL12RB2	Q99665	862 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	SEMA3C	Q99985	751 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	HDAC8	Q9BY41	377 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	CEP41	Q9BYV8	373 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	POLR1E	Q9GZS1	481 aa	Known RBP	11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	SGK2	Q9HBY8	427 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	AMACR	Q9UHK6	382 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	PIKFYVE	Q9Y2I7	2098 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	ZNF292	O60281	2723 aa		11.7	□□□□□ -0.54
ATP2A3-208	ENST00000570845	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.69	□□□□□ -0.54
ATP2A3-208	ENST00000570845	PRR23A	A6NEV1	266 aa		11.69	□□□□□ -0.54
ATP2A3-208	ENST00000570845	LRRC72	A6NJI9	287 aa		11.69	□□□□□ -0.54
ATP2A3-208	ENST00000570845	C16orf96	A6NNT2	1141 aa		11.69	□□□□□ -0.54
ATP2A3-208	ENST00000570845	SLC7A4	O43246	635 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms