RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 EDDM13A0A1B0GTR0 161 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 TARSL2A2RTX5 802 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ERI2A8K979 691 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PRRT4C9JH25 899 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 J3QL48 77 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ERVH48-1M5A8F1 160 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 TNFRSF10AO00220 468 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PSMD3O43242 534 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SYNCRIPO60506 623 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 RNASEH1O60930 286 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ZMPSTE24O75844 475 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 EPHX1P07099 455 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 APRTP07741 180 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 CISD3P0C7P0 127 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ZSCAN5DPP0CG00 497 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ETS1P14921 441 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 NFKBIAP25963 317 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SERPINA4P29622 427 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 RPL22P35268 128 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 CD86P42081 329 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 TNFRSF4P43489 277 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SCNN1BP51168 640 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 EPHB1P54762 984 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 NRLP54845 237 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 MRPS25P82663 173 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SLC7A5Q01650 507 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 DSC2Q02487 901 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 CAV1Q03135 178 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 BCL2L1Q07817 233 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 DHX9Q08211 1270 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 MPP3Q13368 585 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 CUL1Q13616 776 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ZNF234Q14588 700 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 GRM3Q14832 879 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 UBXN2BQ14CS0 331 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 LAPTM4AQ15012 233 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 DLG2Q15700 870 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PCSK7Q16549 785 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PARP6Q2NL67 630 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 GAB4Q2WGN9 574 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 RALGPS1Q5JS13 557 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 FAXCQ5TGI0 409 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 EGFLAMQ63HQ2 1017 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 NAIF1Q69YI7 327 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 NAPEPLDQ6IQ20 393 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 KIAA0907Q7Z7F0 614 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 LINC00523Q86TU6 105 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PPIL6Q8IXY8 311 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 IFT20Q8IY31 132 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 GJD3Q8N144 294 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SIX5Q8N196 739 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 KDM1BQ8NB78 822 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PLPP7Q8NBV4 271 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 TSEN2Q8NCE0 465 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 LRRN4CLQ8ND94 238 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 IPMKQ8NFU5 416 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 OR2AP1Q8NGE2 309 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 GRIN3AQ8TCU5 1115 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SORCS1Q8WY21 1168 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 IFT81Q8WYA0 676 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 OR8D1Q8WZ84 308 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ISG20Q96AZ6 181 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 MYO19Q96H55 970 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 PPP1R16AQ96I34 528 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 LMLNQ96KR4 655 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 FCRL5Q96RD9 977 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 NUDCD1Q96RS6 583 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SEMA3CQ99985 751 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ERP44Q9BS26 406 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 FAM129AQ9BZQ8 928 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SLC25A51Q9H1U9 297 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 TNKS2Q9H2K2 1166 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATP13A3Q9H7F0 1226 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 USP29Q9HBJ7 922 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 GLOD4Q9HC38 313 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 DYRK4Q9NR20 520 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 VPS45Q9NRW7 570 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 FAM114A2Q9NRY5 505 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 MTRF1LQ9UGC7 380 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 FAM153AQ9UHL3 310 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 MUTYHQ9UIF7 546 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 SHOC2Q9UQ13 582 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ACTL7AQ9Y615 435 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 ANAPC1Q9H1A4 1944 aa6.67□□□□□ -1.34
CTDNEP1-204ENST00000570484 KIF26AQ9ULI4 1882 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SZT2Q5T011 3432 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 NOTCH4Q99466 2003 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ESYT3A0FGR9 886 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 TTC34A8MYJ7 566 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 C1QTNF3-AMACRE9PGA6 284 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 K7ERQ8 282 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 AP3B1O00203 1094 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 DNALI1O14645 258 aaPredicted RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 INSIG1O15503 277 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 SMAD6O43541 496 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 PMPCBO75439 489 aa6.66□□□□□ -1.34
CTDNEP1-204ENST00000570484 ERLIN1O75477 346 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms