RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ZNF366Q8N895 744 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 CCDC89Q8N998 374 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 OR2AP1Q8NGE2 309 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 ATL2Q8NHH9 583 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 MAML1Q92585 1016 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 RUNDC3BQ96NL0 473 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 AGAP3Q96P47 875 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 PSKH2Q96QS6 385 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 POLR1EQ9GZS1 481 aaKnown RBP16.26■□□□□ 0.19
USB1-215ENST00000569252 SCUBE2Q9NQ36 999 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 BCCIPQ9P287 314 aaKnown RBP eCLIP16.26■□□□□ 0.19
USB1-215ENST00000569252 RAB23Q9ULC3 237 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 ACTL7AQ9Y615 435 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 KIAA1549LQ6ZVL6 1849 aa16.26■□□□□ 0.19
USB1-215ENST00000569252 ADAM23O75077 832 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 SIN3BO75182 1162 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 CD160O95971 181 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 ITGAVP06756 1048 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 ACADMP11310 421 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 CCDC15Q0P6D6 951 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 PRPSAP1Q14558 356 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 ELAVL3Q14576 367 aaKnown RBP16.25■□□□□ 0.19
USB1-215ENST00000569252 CRY1Q16526 586 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 MYLK3Q32MK0 819 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 CFAP58Q5T655 872 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 C9orf64Q5T6V5 341 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 FAM46CQ5VWP2 391 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 ITPRIPL1Q6GPH6 555 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 LAIR1Q6GTX8 287 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 DRICH1Q6PGQ1 229 aaPredicted RBP16.25■□□□□ 0.19
USB1-215ENST00000569252 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
USB1-215ENST00000569252 TSTD1Q8NFU3 115 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 OR2T3Q8NH03 318 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 SLC35B2Q8TB61 432 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 GRK7Q8WTQ7 553 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 FRS2Q8WU20 508 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 ATG4AQ8WYN0 398 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 PTPRN2Q92932 1015 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 LRRC45Q96CN5 670 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 MYO19Q96H55 970 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 HEPHQ9BQS7 1158 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 TMEM121Q9BTD3 319 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 PRSS16Q9NQE7 514 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 DYRK4Q9NR20 520 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 IL36AQ9UHA7 158 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 HCN2Q9UL51 889 aa16.25■□□□□ 0.19
USB1-215ENST00000569252 NUP205Q92621 2012 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.24■□□□□ 0.19
USB1-215ENST00000569252 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 CCDC188H7C350 402 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 RNF103O00237 685 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 SLC30A4O14863 429 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 ALOX15BO15296 676 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 PEX11BO96011 259 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 IFNB1P01574 187 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 IL1BP01584 269 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 PRNPP04156 253 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 CA4P22748 312 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 CHRNA3P32297 505 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 CSNK1DP48730 415 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 CAMK2GQ13555 558 aaPredicted RBP16.24■□□□□ 0.19
USB1-215ENST00000569252 WHAMMP3Q1A5X7 153 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 RALGPS1Q5JS13 557 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 ARHGEF18Q6ZSZ5 1173 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 SRLQ86TD4 932 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 STK40Q8N2I9 435 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 CAMKK1Q8N5S9 505 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
USB1-215ENST00000569252 GPR161Q8N6U8 529 aaKnown RBP16.24■□□□□ 0.19
USB1-215ENST00000569252 FAM71DQ8N9W8 422 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 MNS1Q8NEH6 495 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 PRCCQ92733 491 aaPredicted RBP16.24■□□□□ 0.19
USB1-215ENST00000569252 ERLEC1Q96DZ1 483 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 LRIG1Q96JA1 1093 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 EXOC2Q96KP1 924 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 PPP1R2P1Q96PQ5 205 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 IL12RB2Q99665 862 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 OSBPL1AQ9BXW6 950 aa16.24■□□□□ 0.19
USB1-215ENST00000569252 TCRBV21S2A2A0A5A6 115 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 GOLGA6CA6NDK9 693 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 GOLGA6BA6NDN3 693 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ANTXRLA6NF34 631 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 PHF2O75151 1096 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 APBB3O95704 486 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 DNTTP04053 509 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 RETP07949 1114 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 GOLGA6DP0CG33 693 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 PTPN3P26045 913 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 CCNHP51946 323 aaPredicted RBP16.23■□□□□ 0.19
USB1-215ENST00000569252 AP1S1P61966 158 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 BCL2L1Q07817 233 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 SIX1Q15475 284 aaPredicted RBP16.23■□□□□ 0.19
USB1-215ENST00000569252 ARSIQ5FYB1 569 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 ATXN7L2Q5T6C5 722 aaPredicted RBP16.23■□□□□ 0.19
USB1-215ENST00000569252 ZNF776Q68DI1 518 aaPredicted RBP16.23■□□□□ 0.19
USB1-215ENST00000569252 CCDC137Q6PK04 289 aaKnown RBP16.23■□□□□ 0.19
USB1-215ENST00000569252 C4orf22Q6V702 233 aa16.23■□□□□ 0.19
USB1-215ENST00000569252 MAMSTRQ6ZN01 415 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms