RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C5AR1P21730 350 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 CES1P23141 567 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 DEKP35659 375 aaKnown RBP16.95■□□□□ 0.3
COMMD4-224ENST00000568877 FNTBP49356 437 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 NCEH1Q6PIU2 408 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 GDPD4Q6W3E5 623 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 WDR5BQ86VZ2 330 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 ZNF567Q8N184 647 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 NELL1Q92832 810 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 PRRX2Q99811 253 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 SEMA3CQ99985 751 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 TMEM121Q9BTD3 319 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 PABPC3Q9H361 631 aaKnown RBP16.95■□□□□ 0.3
COMMD4-224ENST00000568877 NOD2Q9HC29 1040 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 ITM2CQ9NQX7 267 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 KLHL8Q9P2G9 620 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-224ENST00000568877 ZNF148Q9UQR1 794 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 ZDBF2Q9HCK1 2354 aa16.95■□□□□ 0.3
COMMD4-224ENST00000568877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 ZNF217O75362 1048 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 UGT2B4P06133 528 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 ITGAVP06756 1048 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 STIP1P31948 543 aaKnown RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 TPMTP51580 245 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 METAP1P53582 386 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 DSC2Q02487 901 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 NIPAL4Q0D2K0 466 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 SFSWAPQ12872 951 aaKnown RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 POM121L1PQ3SYA9 428 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 TTC31Q49AM3 519 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 PID1Q7Z2X4 250 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 FAM71DQ8N9W8 422 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 ARRDC2Q8TBH0 407 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 PPP1R16AQ96I34 528 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 NSMCE3Q96MG7 304 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 ZNF641Q96N77 438 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 ATP13A3Q9H7F0 1226 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 GLOD4Q9HC38 313 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 USP36Q9P275 1121 aaKnown RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 RNF14Q9UBS8 474 aa16.94■□□□□ 0.3
COMMD4-224ENST00000568877 DRG1Q9Y295 367 aaKnown RBP16.94■□□□□ 0.3
COMMD4-224ENST00000568877 SHROOM3Q8TF72 1996 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 GOLGA6L10A0A0M3HER8 536 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 C5orf60A6NFR6 353 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 PIGNO95427 931 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 SERPINA4P29622 427 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 CD68P34810 354 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-224ENST00000568877 PAFAH1B1P43034 410 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 GDF10P55107 478 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 BCL2L1Q07817 233 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 CYP1B1Q16678 543 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 USP39Q53GS9 565 aaKnown RBP16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ZNF805Q5CZA5 627 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ANKRD20A2Q5SQ80 823 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ANKRD20A1Q5TYW2 823 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ANKRD20A3Q5VUR7 823 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 USP30Q70CQ3 517 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 HDDC3Q8N4P3 179 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 AADATQ8N5Z0 425 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 C12orf50Q8NA57 414 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-224ENST00000568877 GANCQ8TET4 914 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ZNF592Q92610 1267 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 MAGOHBQ96A72 148 aaKnown RBP16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ARRDC3Q96B67 414 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 IMP4Q96G21 291 aaKnown RBP16.93■□□□□ 0.3
COMMD4-224ENST00000568877 KLHL32Q96NJ5 620 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 OMDQ99983 421 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 SLC25A51Q9H1U9 297 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 SUV39H2Q9H5I1 410 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 DYRK4Q9NR20 520 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 ZSCAN32Q9NX65 697 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 FBXL12Q9NXK8 326 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 NCKAP1Q9Y2A7 1128 aa16.93■□□□□ 0.3
COMMD4-224ENST00000568877 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 A0A1W2PP55 124 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 OPHN1O60890 802 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 GCATO75600 419 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 RNASEH2AO75792 299 aaKnown RBP16.92■□□□□ 0.3
COMMD4-224ENST00000568877 IGLV3-19P01714 112 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 SERPINF2P08697 491 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 NFKB1P19838 968 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 ITGB7P26010 798 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 DRD3P35462 400 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 P2RY2P41231 377 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 KCNJ1P48048 391 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 CNTN1Q12860 1018 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 IHHQ14623 411 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 MAP7D1Q3KQU3 841 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 KBTBD6Q86V97 674 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 CCDC110Q8TBZ0 833 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 HCAR2Q8TDS4 363 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 RLN3Q8WXF3 142 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 RTP4Q96DX8 246 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 SPATA13Q96N96 652 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 HDAC8Q9BY41 377 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 CD93Q9NPY3 652 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms