RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PCDH19Q8TAB3 1148 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 TSACCQ96A04 125 aaPredicted RBP15.1■□□□□ 0.01
USB1-214ENST00000568848 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
USB1-214ENST00000568848 ATXN7L1Q9ULK2 861 aaPredicted RBP15.1■□□□□ 0.01
USB1-214ENST00000568848 PCDHGA8Q9Y5G5 932 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 ATP6V1DQ9Y5K8 247 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 A0A1W2PQM1 296 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 KRIT1O00522 736 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 NEMP1O14524 444 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 GJB6O95452 261 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 CLCN1P35523 988 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 ETV5P41161 510 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 GNA12Q03113 381 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 SGCGQ13326 291 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 ARL13BQ3SXY8 428 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 FAXCQ5TGI0 409 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 RD3Q7Z3Z2 195 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 CLEC14AQ86T13 490 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 Q8N9G6 341 aaPredicted RBP15.09■□□□□ 0.01
USB1-214ENST00000568848 JPH3Q8WXH2 748 aaPredicted RBP15.09■□□□□ 0.01
USB1-214ENST00000568848 SHC3Q92529 594 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 PPP1R16AQ96I34 528 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 CFAP57Q96MR6 1250 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 KLHL32Q96NJ5 620 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 CCNL2Q96S94 520 aaPredicted RBP15.09■□□□□ 0.01
USB1-214ENST00000568848 PPP1R9BQ96SB3 815 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 USP29Q9HBJ7 922 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 SIX2Q9NPC8 291 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
USB1-214ENST00000568848 SPASTQ9UBP0 616 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 PISDQ9UG56 409 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 PADI4Q9UM07 663 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 PCDHGC3Q9UN70 934 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 LRP4O75096 1905 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 NBASA2RRP1 2371 aa15.09■□□□□ 0.01
USB1-214ENST00000568848 UNC13CQ8NB66 2214 aa15.08■□□□□ 0
USB1-214ENST00000568848 ANKRD36A6QL64 1941 aa15.08■□□□□ 0
USB1-214ENST00000568848 ZFC3H1O60293 1989 aaKnown RBP15.08■□□□□ 0
USB1-214ENST00000568848 IGLV3-10A0A075B6K4 115 aa15.08■□□□□ 0
USB1-214ENST00000568848 CCDC187A0A096LP49 1063 aa15.08■□□□□ 0
USB1-214ENST00000568848 FAM72CH0Y354 149 aa15.08■□□□□ 0
USB1-214ENST00000568848 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
USB1-214ENST00000568848 INSIG1O15503 277 aa15.08■□□□□ 0
USB1-214ENST00000568848 PRKCGP05129 697 aa15.08■□□□□ 0
USB1-214ENST00000568848 ANXA6P08133 673 aa15.08■□□□□ 0
USB1-214ENST00000568848 UGT1A5P35504 534 aa15.08■□□□□ 0
USB1-214ENST00000568848 CLCN6P51797 869 aa15.08■□□□□ 0
USB1-214ENST00000568848 THOP1P52888 689 aa15.08■□□□□ 0
USB1-214ENST00000568848 MORC3Q14149 939 aa15.08■□□□□ 0
USB1-214ENST00000568848 MEA1Q16626 185 aa15.08■□□□□ 0
USB1-214ENST00000568848 FAM102AQ5T9C2 384 aaPredicted RBP15.08■□□□□ 0
USB1-214ENST00000568848 FAM72AQ5TYM5 149 aa15.08■□□□□ 0
USB1-214ENST00000568848 FAM72DQ6L9T8 149 aa15.08■□□□□ 0
USB1-214ENST00000568848 IGF2-ASQ6U949 168 aa15.08■□□□□ 0
USB1-214ENST00000568848 TMPRSS9Q7Z410 1059 aa15.08■□□□□ 0
USB1-214ENST00000568848 SETD3Q86TU7 594 aaPredicted RBP15.08■□□□□ 0
USB1-214ENST00000568848 FAM72BQ86X60 149 aa15.08■□□□□ 0
USB1-214ENST00000568848 ZFAND4Q86XD8 727 aa15.08■□□□□ 0
USB1-214ENST00000568848 HID1Q8IV36 788 aa15.08■□□□□ 0
USB1-214ENST00000568848 ARL14Q8N4G2 192 aa15.08■□□□□ 0
USB1-214ENST00000568848 PCDH20Q8N6Y1 951 aaKnown RBP15.08■□□□□ 0
USB1-214ENST00000568848 EMC1Q8N766 993 aa15.08■□□□□ 0
USB1-214ENST00000568848 CENPTQ96BT3 561 aa15.08■□□□□ 0
USB1-214ENST00000568848 CPEB1Q9BZB8 566 aaKnown RBP15.08■□□□□ 0
USB1-214ENST00000568848 KLC2Q9H0B6 622 aa15.08■□□□□ 0
USB1-214ENST00000568848 FOXJ2Q9P0K8 574 aa15.08■□□□□ 0
USB1-214ENST00000568848 DNAI1Q9UI46 699 aa15.08■□□□□ 0
USB1-214ENST00000568848 CSNK1G3Q9Y6M4 447 aa15.08■□□□□ 0
USB1-214ENST00000568848 CHD5Q8TDI0 1954 aa15.07■□□□□ 0
USB1-214ENST00000568848 CAPN8A6NHC0 703 aa15.07■□□□□ 0
USB1-214ENST00000568848 LMO7DNF2Z398 122 aa15.07■□□□□ 0
USB1-214ENST00000568848 NTN3O00634 580 aaPredicted RBP15.07■□□□□ 0
USB1-214ENST00000568848 PLD2O14939 933 aa15.07■□□□□ 0
USB1-214ENST00000568848 RPLP0P05388 317 aaKnown RBP15.07■□□□□ 0
USB1-214ENST00000568848 ITGB6P18564 788 aa15.07■□□□□ 0
USB1-214ENST00000568848 EIF4A3P38919 411 aaKnown RBP15.07■□□□□ 0
USB1-214ENST00000568848 PAK1Q13153 545 aa15.07■□□□□ 0
USB1-214ENST00000568848 IRF4Q15306 451 aa15.07■□□□□ 0
USB1-214ENST00000568848 ALG11Q2TAA5 492 aa15.07■□□□□ 0
USB1-214ENST00000568848 BRMS1LQ5PSV4 323 aa15.07■□□□□ 0
USB1-214ENST00000568848 XYLT1Q86Y38 959 aa15.07■□□□□ 0
USB1-214ENST00000568848 DCP2Q8IU60 420 aaKnown RBP15.07■□□□□ 0
USB1-214ENST00000568848 FBXO39Q8N4B4 442 aa15.07■□□□□ 0
USB1-214ENST00000568848 TP53I13Q8NBR0 393 aaPredicted RBP15.07■□□□□ 0
USB1-214ENST00000568848 HTR3CQ8WXA8 447 aa15.07■□□□□ 0
USB1-214ENST00000568848 CCDC34Q96HJ3 373 aa15.07■□□□□ 0
USB1-214ENST00000568848 FAM117AQ9C073 453 aa15.07■□□□□ 0
USB1-214ENST00000568848 EVA1BQ9NVM1 165 aa15.07■□□□□ 0
USB1-214ENST00000568848 APEX2Q9UBZ4 518 aa15.07■□□□□ 0
USB1-214ENST00000568848 IL17BQ9UHF5 180 aa15.07■□□□□ 0
USB1-214ENST00000568848 DNAJC12Q9UKB3 198 aa15.07■□□□□ 0
USB1-214ENST00000568848 NBPF19A0A087WUL8 3843 aa15.06■□□□□ 0
USB1-214ENST00000568848 SPENQ96T58 3664 aaKnown RBP15.06■□□□□ 0
USB1-214ENST00000568848 PRAMEF33A0A0G2JMD5 474 aa15.06■□□□□ 0
USB1-214ENST00000568848 ILVBLA1L0T0 632 aa15.06■□□□□ 0
USB1-214ENST00000568848 GOLGA6L4A6NEF3 574 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms