RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 KMT2EQ8IZD2 1858 aa12.8□□□□□ -0.36
SF3B3-206ENST00000565990 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 C5orf60A6NFR6 353 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 H7C0C1 242 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 KCNK1O00180 336 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 SYNCRIPO60506 623 aaKnown RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 SIN3BO75182 1162 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 MYBL2P10244 700 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 HOXB2P14652 356 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 WASP42768 502 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 RGRP47804 291 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 ATP5OP48047 213 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 NUBP1P53384 320 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 COPAP53621 1224 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 ZBTB17Q13105 803 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 CFAP58Q5T655 872 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 DARS2Q6PI48 645 aaKnown RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 DPY19L3Q6ZPD9 716 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 Q6ZVU0 165 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 CDKL3Q8IVW4 592 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 BBS5Q8N3I7 341 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 CAMKK1Q8N5S9 505 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 ARFGAP2Q8N6H7 521 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 ZNF366Q8N895 744 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 OR2T3Q8NH03 318 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 ARRDC2Q8TBH0 407 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 CINPQ9BW66 212 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 FAM129AQ9BZQ8 928 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 C10orf88Q9H8K7 445 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 FBRSQ9HAH7 460 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 HECAQ9UBI9 543 aaPredicted RBP12.79□□□□□ -0.36
SF3B3-206ENST00000565990 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 TRHDEQ9UKU6 1024 aa12.79□□□□□ -0.36
SF3B3-206ENST00000565990 K7ESF4 209 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 KRIT1O00522 736 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 ZBTB24O43167 697 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 GCATO75600 419 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 HEXIM1O94992 359 aaKnown RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 TDGF1P13385 188 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 CHRNA3P32297 505 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 CCR3P51677 355 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 RHOAP61586 193 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 ELAVL3Q14576 367 aaKnown RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 IHHQ14623 411 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 STARD3Q14849 445 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 NCEH1Q6PIU2 408 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 MAATS1Q7Z4T9 603 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 CROCCP2Q86T23 111 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 MAML2Q8IZL2 1156 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 STK40Q8N2I9 435 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 HCAR2Q8TDS4 363 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 SEC14L1Q92503 715 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 TADA1Q96BN2 335 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 NSMCE3Q96MG7 304 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 NUDCD1Q96RS6 583 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 HEPHQ9BQS7 1158 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 TMEM121Q9BTD3 319 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 C1QTNF1Q9BXJ1 281 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 MKRN2Q9H000 416 aaKnown RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 TNKS2Q9H2K2 1166 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 POLMQ9NP87 494 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 PRMT8Q9NR22 394 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 SMARCAL1Q9NZC9 954 aa12.78□□□□□ -0.36
SF3B3-206ENST00000565990 RRP15Q9Y3B9 282 aaKnown RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
SF3B3-206ENST00000565990 RNF103O00237 685 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 IGSF6O95976 241 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 HLA-DQB2P05538 268 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 CTSLP07711 333 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 GABRG2P18507 467 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 CD68P34810 354 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 SATB1Q01826 763 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 LMNB2Q03252 620 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 NIPAL4Q0D2K0 466 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 SNX1Q13596 522 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF235Q14590 738 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 GRM3Q14832 879 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ATXN7L2Q5T6C5 722 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ANKRD20A3Q5VUR7 823 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 TTC27Q6P3X3 843 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 PID1Q7Z2X4 250 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 TMPRSS6Q8IU80 811 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 C1orf210Q8IVY1 113 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms