RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PRUNE1Q86TP1 453 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 STK40Q8N2I9 435 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 PGBD5Q8N414 524 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 TAB3Q8N5C8 712 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 ZNF366Q8N895 744 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 GLIS1Q8NBF1 620 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NOA1Q8NC60 698 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 PJA1Q8NG27 643 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 OR2A12Q8NGT7 310 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 OR6K2Q8NGY2 324 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 OR2T3Q8NH03 318 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ARRDC2Q8TBH0 407 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 UBXN4Q92575 508 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 PTPRN2Q92932 1015 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 IFT43Q96FT9 208 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 IMP4Q96G21 291 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 PPP1R16AQ96I34 528 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ZNF641Q96N77 438 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 TUBGCP5Q96RT8 1024 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 RBM15Q96T37 977 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDH1-208ENST00000565810 ACOX2Q99424 681 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 IER2Q9BTL4 223 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 LRRC1Q9BTT6 524 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 FSD1LQ9BXM9 530 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 OSBPL1AQ9BXW6 950 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 CPEB1Q9BZB8 566 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 TRIM31Q9BZY9 425 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 SUV39H2Q9H5I1 410 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 ZDHHC6Q9H6R6 413 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NOD2Q9HC29 1040 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 DYRK4Q9NR20 520 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 HCN2Q9UL51 889 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 TPX2Q9ULW0 747 aaKnown RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 MMP17Q9ULZ9 603 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 NEU2Q9Y3R4 380 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 MTF2Q9Y483 593 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 ARIH1Q9Y4X5 557 aaPredicted RBP7.88□□□□□ -1.15
CDH1-208ENST00000565810 RAI2Q9Y5P3 530 aa7.88□□□□□ -1.15
CDH1-208ENST00000565810 TTC24A2A3L6 582 aaPredicted RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 TMEM221A6NGB7 291 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 M0R296 226 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SMAPO00193 183 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 AP3B1O00203 1094 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 DNALI1O14645 258 aaPredicted RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 ADAM23O75077 832 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SOCS5O75159 536 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PMPCBO75439 489 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 HEXIM1O94992 359 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 MT-CYBP00156 380 aaPredicted RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 IL1BP01584 269 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 EPOP01588 193 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 APRTP07741 180 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 RHOXF2BP0C7M4 288 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ACADMP11310 421 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ITIH2P19823 946 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 TPSB2P20231 275 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 XPAP23025 273 aaPredicted RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 RPS9P46781 194 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 DGKEP52429 567 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 TERF1P54274 439 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 EPHB1P54762 984 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 DRG2P55039 364 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 WNT3AP56704 352 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 POLR2LP62875 67 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 SKOR1P84550 965 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 CDK16Q00536 496 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SLC7A5Q01650 507 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 GUCY2DQ02846 1103 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 CDK18Q07002 472 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 CAMK2GQ13555 558 aaPredicted RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 SEMA5AQ13591 1074 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 TPSAB1Q15661 275 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 CRY1Q16526 586 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PCSK7Q16549 785 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 FAM182AQ5T1J6 154 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ARMC12Q5T9G4 340 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 NAPEPLDQ6IQ20 393 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PPP1R21Q6ZMI0 780 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 Q6ZS52 159 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SYT13Q7L8C5 426 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 LINC00523Q86TU6 105 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PRPF39Q86UA1 669 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 MMAAQ8IVH4 418 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 PPIL6Q8IXY8 311 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 IFT20Q8IY31 132 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ZNF687Q8N1G0 1237 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 CHST14Q8NCH0 376 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 TMIEQ8NEW7 156 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 IPMKQ8NFU5 416 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SPATA22Q8NHS9 363 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 HCAR2Q8TDS4 363 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 PDCD6IPQ8WUM4 868 aaKnown RBP7.87□□□□□ -1.15
CDH1-208ENST00000565810 CLDN23Q96B33 292 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 SNF8Q96H20 258 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 RHOXF2Q9BQY4 288 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 TRIM51Q9BSJ1 452 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 ADGRE3Q9BY15 652 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 DPH5Q9H2P9 285 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 CHRDQ9H2X0 955 aa7.87□□□□□ -1.15
CDH1-208ENST00000565810 MTG2Q9H4K7 406 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms