RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 DMTF1Q9Y222 760 aa18.96■□□□□ 0.63
CMTM3-210ENST00000565666 ANKRD6Q9Y2G4 727 aa18.96■□□□□ 0.63
CMTM3-210ENST00000565666 EPN1Q9Y6I3 576 aaPredicted RBP18.96■□□□□ 0.63
CMTM3-210ENST00000565666 DMXL1Q9Y485 3027 aa18.96■□□□□ 0.63
CMTM3-210ENST00000565666 A0A1W2PQU0 124 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 LRRD1A4D1F6 860 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 C10orf142B7Z368 130 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 NEMP1O14524 444 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 INSIG1O15503 277 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 SPOPO43791 374 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 FECHP22830 423 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 KDELR1P24390 212 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 CD38P28907 300 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 ZNF235Q14590 738 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 LBRQ14739 615 aaKnown RBP18.95■□□□□ 0.62
CMTM3-210ENST00000565666 CFAP58Q5T655 872 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 NAPEPLDQ6IQ20 393 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 HORMAD1Q86X24 394 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 TSEN2Q8NCE0 465 aaKnown RBP18.95■□□□□ 0.62
CMTM3-210ENST00000565666 PCDH19Q8TAB3 1148 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 KLK6Q92876 244 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 RAB7BQ96AH8 199 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 CPEB1Q9BZB8 566 aaKnown RBP18.95■□□□□ 0.62
CMTM3-210ENST00000565666 GAREM1Q9H706 876 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 SEPT3Q9UH03 358 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 TFR2Q9UP52 801 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 HYOU1Q9Y4L1 999 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 CEP250Q9BV73 2442 aa18.95■□□□□ 0.62
CMTM3-210ENST00000565666 TP53BP1Q12888 1972 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-210ENST00000565666 SHROOM3Q8TF72 1996 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 TM4SF5O14894 197 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 SLC31A1O15431 190 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 MFSD11O43934 449 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 PIGNO95427 931 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 KRT1P04264 644 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 XPAP23025 273 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-210ENST00000565666 RENBPP51606 427 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 HADHBP55084 474 aaKnown RBP18.94■□□□□ 0.62
CMTM3-210ENST00000565666 BNC1Q01954 994 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 PAFAH1B3Q15102 231 aaKnown RBP18.94■□□□□ 0.62
CMTM3-210ENST00000565666 KIF19Q2TAC6 998 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 HLA-BQ31612 363 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 NCBP2-AS2Q69YL0 99 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 SRLQ86TD4 932 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 RHOT1Q8IXI2 618 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 BBS5Q8N3I7 341 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 PAF1Q8N7H5 531 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 RAPGEF5Q92565 580 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 FEM1CQ96JP0 617 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 BAG1Q99933 345 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-210ENST00000565666 DNAAF2Q9NVR5 837 aaKnown RBP18.94■□□□□ 0.62
CMTM3-210ENST00000565666 FADS3Q9Y5Q0 445 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 SNX11Q9Y5W9 270 aa18.94■□□□□ 0.62
CMTM3-210ENST00000565666 SPTBN4Q9H254 2564 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 PRAMEF26H0Y7S4 382 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 VILLO15195 856 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 AP1G1O43747 822 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 MAFKO60675 156 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 PRLRP16471 622 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 COMTP21964 271 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 ABL2P42684 1182 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 RGRP47804 291 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 CSNK1DP48730 415 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 RPS21P63220 83 aaKnown RBP18.93■□□□□ 0.62
CMTM3-210ENST00000565666 SLC10A7Q0GE19 358 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 STAT4Q14765 748 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 PPM1JQ5JR12 505 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 SEL1L3Q68CR1 1132 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 KIAA1161Q6NSJ0 714 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 RAD9BQ6WBX8 426 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 TTC7BQ86TV6 843 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 LRRC49Q8IUZ0 686 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-210ENST00000565666 FAF2Q96CS3 445 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 TUBGCP5Q96RT8 1024 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 MYOCQ99972 504 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 DDX56Q9NY93 547 aaKnown RBP18.93■□□□□ 0.62
CMTM3-210ENST00000565666 DKK3Q9UBP4 350 aa18.93■□□□□ 0.62
CMTM3-210ENST00000565666 ZFR2Q9UPR6 939 aaKnown RBP18.93■□□□□ 0.62
CMTM3-210ENST00000565666 TMEM131Q92545 1883 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 A0A0A6YYK5 440 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-210ENST00000565666 WNT9AO14904 365 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 TSPAN6O43657 245 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 BUB1BO60566 1050 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-210ENST00000565666 MAP3K6O95382 1288 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 WNT1P04628 370 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 SERPINA4P29622 427 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 SCNN1BP51168 640 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 ZNF284Q2VY69 593 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 LRRC73Q5JTD7 316 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 LRRC38Q5VT99 294 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 VOPP1Q96AW1 172 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 RNF157Q96PX1 679 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 PSKH2Q96QS6 385 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 MAK16Q9BXY0 300 aaKnown RBP18.92■□□□□ 0.62
CMTM3-210ENST00000565666 SUV39H2Q9H5I1 410 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 ATP13A3Q9H7F0 1226 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 IL21RQ9HBE5 538 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 ITM2BQ9Y287 266 aa18.92■□□□□ 0.62
CMTM3-210ENST00000565666 ANKRD36A6QL64 1941 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms