RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 GPAT4Q86UL3 456 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 GPSM1Q86YR5 675 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 FAM185AQ8N0U4 392 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 HORMAD2Q8N7B1 307 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 OR4N2Q8NGD1 307 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 KLHL29Q96CT2 875 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 MSI2Q96DH6 328 aaKnown RBP4.72□□□□□ -1.65
CHD9-215ENST00000565442 SAAL1Q96ER3 474 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 NR1H4Q96RI1 486 aaPredicted RBP4.72□□□□□ -1.65
CHD9-215ENST00000565442 WDR6Q9NNW5 1121 aaKnown RBP4.72□□□□□ -1.65
CHD9-215ENST00000565442 KRT84Q9NSB2 600 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 BLOC1S4Q9NUP1 217 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 TRNAU1APQ9NX07 287 aaKnown RBP4.72□□□□□ -1.65
CHD9-215ENST00000565442 KIAA1456Q9P272 454 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.72□□□□□ -1.65
CHD9-215ENST00000565442 PIAS3Q9Y6X2 628 aa4.72□□□□□ -1.65
CHD9-215ENST00000565442 PGPEP1LA6NFU8 196 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 NPIPB15A6NHN6 443 aaPredicted RBP4.71□□□□□ -1.66
CHD9-215ENST00000565442 ZNF814B7Z6K7 855 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 IFNL4K9M1U5 179 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 SNAP23O00161 211 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 TLX3O43711 291 aaPredicted RBP4.71□□□□□ -1.66
CHD9-215ENST00000565442 SLC2A4P14672 509 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 ICAM3P32942 547 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 TNFSF8P32971 234 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 RFC1P35251 1148 aaPredicted RBP4.71□□□□□ -1.66
CHD9-215ENST00000565442 SLC18A2Q05940 514 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 VEPH1Q14D04 833 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 TAF11Q15544 211 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 TRIP6Q15654 476 aaKnown RBP4.71□□□□□ -1.66
CHD9-215ENST00000565442 ASPHD1Q5U4P2 390 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 SHC4Q6S5L8 630 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 C4orf50Q6ZRC1 276 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 TMTC3Q6ZXV5 915 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 MEPCEQ7L2J0 689 aaKnown RBP4.71□□□□□ -1.66
CHD9-215ENST00000565442 SERPINA11Q86U17 422 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 LURAP1LQ8IV03 231 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 FAM217AQ8IXS0 508 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 CADM3Q8N126 398 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 C11orf65Q8NCR3 313 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 PIP5K1AQ99755 562 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 CHCHD6Q9BRQ6 235 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 NUF2Q9BZD4 464 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 LHPPQ9H008 270 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 RNF146Q9NTX7 359 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 TBC1D14Q9P2M4 693 aa4.71□□□□□ -1.66
CHD9-215ENST00000565442 ZMYM2Q9UBW7 1377 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 A0A1W2PQM1 296 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 C17orf102A2RUQ5 167 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 HSPB6O14558 160 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 CNOT3O75175 753 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 DDX58O95786 925 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 CLEC3BP05452 202 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 SPARCP09486 303 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 HSPA1AP0DMV8 641 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 HSPA1BP0DMV9 641 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 CHMP24386 653 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 RPS3AP61247 264 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 YWHAZP63104 245 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 RUNX2Q13950 521 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 ERV3-1Q14264 604 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 INPP5JQ15735 1006 aaPredicted RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 SLC45A4Q5BKX6 768 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 TMEM71Q6P5X7 295 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 KIAA2013Q8IYS2 634 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 CADM4Q8NFZ8 388 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 ETNPPLQ8TBG4 499 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 TMEM174Q8WUU8 243 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 BARD1Q99728 777 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 GLIS2Q9BZE0 524 aaPredicted RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 VPS33BQ9H267 617 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 RANBP17Q9H2T7 1088 aaKnown RBP4.7□□□□□ -1.66
CHD9-215ENST00000565442 MAP6D1Q9H9H5 199 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 BRF2Q9HAW0 419 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 HEY2Q9UBP5 337 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 PSAT1Q9Y617 370 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 SLC4A4Q9Y6R1 1079 aa4.7□□□□□ -1.66
CHD9-215ENST00000565442 TDRD9Q8NDG6 1382 aaKnown RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 A0A096LPK6 155 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 PI4KAP2A4QPH2 592 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 CBY3A6NI87 242 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 HMGB1P1B2RPK0 211 aaPredicted RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 F5H0A9 414 aaPredicted RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 STMND1H3BQB6 276 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 KIF1CO43896 1103 aaKnown RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 ATG13O75143 517 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 SEC31AO94979 1220 aaKnown RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 ARL1P40616 181 aaPredicted RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 CASP2P42575 452 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 CLCN5P51795 746 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 EIF5P55010 431 aaKnown RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 EIF3BP55884 814 aaKnown RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 SETQ01105 290 aaPredicted RBP4.69□□□□□ -1.66
CHD9-215ENST00000565442 NUGGCQ68CJ6 796 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 SLC46A3Q7Z3Q1 461 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 TBC1D26Q86UD7 250 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 TMC8Q8IU68 726 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms