RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TIMM23O14925 209 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 PIP5K1CO60331 668 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 CNPP09543 421 aaKnown RBP5.03□□□□□ -1.6
UBR1-205ENST00000564540 C21orf33P30042 268 aaPredicted RBP5.03□□□□□ -1.6
UBR1-205ENST00000564540 MXI1P50539 228 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 FAM27E3Q08E93 113 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 LPIN1Q14693 890 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 HLFQ16534 295 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 C16orf82Q7Z2V1 217 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 CHD1LQ86WJ1 897 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 TXNDC15Q96J42 360 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 TWNKQ96RR1 684 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 FIZ1Q96SL8 496 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 YME1L1Q96TA2 773 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 SLC25A33Q9BSK2 321 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.03□□□□□ -1.6
UBR1-205ENST00000564540 MROH8Q9H579 483 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 SLC32A1Q9H598 525 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 ENTPD7Q9NQZ7 604 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 TMEM51Q9NW97 253 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 AGO1Q9UL18 857 aaKnown RBP5.03□□□□□ -1.6
UBR1-205ENST00000564540 IGLV5-52A0A0A0MRZ9 124 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 TTKP33981 857 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 CENPAP49450 140 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 PAPOLAP51003 745 aaKnown RBP5.02□□□□□ -1.61
UBR1-205ENST00000564540 SEC61A1P61619 476 aaKnown RBP5.02□□□□□ -1.61
UBR1-205ENST00000564540 ADORA2A-AS1P86434 159 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 TRAF2Q12933 501 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 ANKRD1Q15327 319 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 FBXO47Q5MNV8 452 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 C9orf57Q5W0N0 161 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 TYW3Q6IPR3 259 aaKnown RBP5.02□□□□□ -1.61
UBR1-205ENST00000564540 DLK2Q6UY11 383 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 LDHAL6AQ6ZMR3 332 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 DENND6AQ8IWF6 608 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 SPATA3Q8NHX4 192 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 GDPD5Q8WTR4 605 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 CNOT9Q92600 299 aaKnown RBP5.02□□□□□ -1.61
UBR1-205ENST00000564540 RNF183Q96D59 192 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 IL25Q9H293 177 aa5.02□□□□□ -1.61
UBR1-205ENST00000564540 ADGRF5Q8IZF2 1346 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 DYTNA2CJ06 578 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 SH2D7A6NKC9 451 aaPredicted RBP5.01□□□□□ -1.61
UBR1-205ENST00000564540 J3KR12 359 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 PER2O15055 1255 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 SERPINI2O75830 405 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 CHRM4P08173 479 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 HALP42357 657 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 COMPP49747 757 aaPredicted RBP5.01□□□□□ -1.61
UBR1-205ENST00000564540 SLC12A1Q13621 1099 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 PLEKHO1Q53GL0 409 aaPredicted RBP5.01□□□□□ -1.61
UBR1-205ENST00000564540 IL20RBQ6UXL0 311 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 PRSS45Q7RTY3 260 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 NR2C2APQ86WQ0 139 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 MB21D2Q8IYB1 491 aaPredicted RBP5.01□□□□□ -1.61
UBR1-205ENST00000564540 RAB40AQ8WXH6 277 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 PYM1Q9BRP8 204 aaKnown RBP5.01□□□□□ -1.61
UBR1-205ENST00000564540 PPCSQ9HAB8 311 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 SUFUQ9UMX1 484 aa5.01□□□□□ -1.61
UBR1-205ENST00000564540 TCF20Q9UGU0 1960 aaKnown RBP5□□□□□ -1.61
UBR1-205ENST00000564540 A0A1B0GVM2 712 aa5□□□□□ -1.61
UBR1-205ENST00000564540 SRRM3A6NNA2 597 aaPredicted RBP5□□□□□ -1.61
UBR1-205ENST00000564540 BTBD18B2RXH4 712 aa5□□□□□ -1.61
UBR1-205ENST00000564540 CEP104O60308 925 aa5□□□□□ -1.61
UBR1-205ENST00000564540 LIFRP42702 1097 aa5□□□□□ -1.61
UBR1-205ENST00000564540 NAA25Q14CX7 972 aa5□□□□□ -1.61
UBR1-205ENST00000564540 MOB3CQ70IA8 216 aa5□□□□□ -1.61
UBR1-205ENST00000564540 H1FNTQ75WM6 255 aaPredicted RBP5□□□□□ -1.61
UBR1-205ENST00000564540 LURAP1LQ8IV03 231 aa5□□□□□ -1.61
UBR1-205ENST00000564540 ZMIZ2Q8NF64 920 aa5□□□□□ -1.61
UBR1-205ENST00000564540 TMEM170AQ8WVE7 144 aa5□□□□□ -1.61
UBR1-205ENST00000564540 RTP4Q96DX8 246 aa5□□□□□ -1.61
UBR1-205ENST00000564540 REEP2Q9BRK0 252 aa5□□□□□ -1.61
UBR1-205ENST00000564540 EPHX3Q9H6B9 360 aa5□□□□□ -1.61
UBR1-205ENST00000564540 PLSCR4Q9NRQ2 329 aa5□□□□□ -1.61
UBR1-205ENST00000564540 SPATS2LQ9NUQ6 558 aaKnown RBP5□□□□□ -1.61
UBR1-205ENST00000564540 IFT80Q9P2H3 777 aaPredicted RBP5□□□□□ -1.61
UBR1-205ENST00000564540 GPR52Q9Y2T5 361 aa5□□□□□ -1.61
UBR1-205ENST00000564540 SLC45A1Q9Y2W3 748 aa5□□□□□ -1.61
UBR1-205ENST00000564540 SMTNL1A8MU46 457 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 ATP2C2O75185 946 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 TFPIP10646 304 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 RPL3P39023 403 aaKnown RBP4.99□□□□□ -1.61
UBR1-205ENST00000564540 CXCR3P49682 368 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 GAS1P54826 345 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 TUBA1BP68363 451 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 RPL36AP83881 106 aaKnown RBP4.99□□□□□ -1.61
UBR1-205ENST00000564540 EEF1A2Q05639 463 aaKnown RBP4.99□□□□□ -1.61
UBR1-205ENST00000564540 COASYQ13057 564 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 RETSATQ6NUM9 610 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 C17orf99Q6UX52 265 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 CCDC105Q8IYK2 499 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 CPXM2Q8N436 756 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 USP38Q8NB14 1042 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 ARRDC2Q8TBH0 407 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 SH3KBP1Q96B97 665 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 ISCA1Q9BUE6 129 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 C1QTNF4Q9BXJ3 329 aa4.99□□□□□ -1.61
UBR1-205ENST00000564540 ALKBH4Q9NXW9 302 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms