RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 GKP32189 559 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 PFN3P60673 137 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 HNRNPKP61978 463 aaKnown RBP eCLIP17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 SGCGQ13326 291 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 FZD2Q14332 565 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 PARP15Q460N3 678 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 DCBLD1Q8N8Z6 715 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 GDAP1L1Q96MZ0 367 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 MCEEQ96PE7 176 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 EPAS1Q99814 870 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 BPIFA3Q9BQP9 254 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 CPEB1Q9BZB8 566 aaKnown RBP17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 USP29Q9HBJ7 922 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 NLGN3Q9NZ94 848 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 DKK3Q9UBP4 350 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 CSNK1G3Q9Y6M4 447 aa17.47■□□□□ 0.39
VPS9D1-203ENST00000563798 IGLON5A6NGN9 336 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 EIF3CLB5ME19 914 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 RIOK3O14730 519 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 FPGTO14772 594 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 FGF10O15520 208 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 BUB1O43683 1085 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 TMCC1O94876 653 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 CSF2P04141 144 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 NME1P15531 152 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 CLDN6P56747 220 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 INSM1Q01101 510 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 SERINC3Q13530 473 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 HS1BP3Q53T59 392 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 GDPD4Q6W3E5 623 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 PARGQ86W56 976 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 RYBPQ8N488 228 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 OR6K2Q8NGY2 324 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 HCAR2Q8TDS4 363 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 CENPTQ96BT3 561 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 KLHL32Q96NJ5 620 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 EIF3CQ99613 913 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 DUSP23Q9BVJ7 150 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 KLC2Q9H0B6 622 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 SEPT11Q9NVA2 429 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 DONSONQ9NYP3 566 aa17.46■□□□□ 0.39
VPS9D1-203ENST00000563798 RASA4BC9J798 803 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 RASA4O43374 803 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 UGT2B4P06133 528 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 GP1BAP07359 652 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 ALPPL2P10696 532 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 SUOXP51687 545 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 OGDHQ02218 1023 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 TYRO3Q06418 890 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 RAD51Q06609 339 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 COL28A1Q2UY09 1125 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 ATXN7L2Q5T6C5 722 aaPredicted RBP17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 PLEKHA7Q6IQ23 1121 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 SCYL2Q6P3W7 929 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 DCUN1D2Q6PH85 259 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 C19orf48Q6RUI8 117 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 PTAR1Q7Z6K3 402 aaPredicted RBP17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 HMCESQ96FZ2 354 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 NAT10Q9H0A0 1025 aaKnown RBP17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 GGT7Q9UJ14 662 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 CLCA2Q9UQC9 943 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 CELSR3Q9NYQ7 3312 aa17.45■□□□□ 0.38
VPS9D1-203ENST00000563798 URB1O60287 2271 aaKnown RBP17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 LY6G6EA0A0G2JKS1 128 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 K7ESM1 405 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TOR1BO14657 336 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TEX33O43247 280 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 IGSF6O95976 241 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 DESP17661 470 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 MAMLD1Q13495 774 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 CDCP2Q5VXM1 449 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 LEKR1Q6ZMV7 388 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TMC6Q7Z403 805 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TTC7BQ86TV6 843 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 PDZD3Q86UT5 571 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 APOLD1Q96LR9 279 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TBATAQ96M53 351 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 LRRC19Q9H756 370 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 PDFQ9HBH1 243 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 PARVAQ9NVD7 372 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 DNAJC28Q9NX36 388 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TAS2R14Q9NYV8 317 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 ITM2BQ9Y287 266 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 U3KQA8 63 aa17.44■□□□□ 0.38
VPS9D1-203ENST00000563798 TSPAN11A1L157 253 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 H3BM21 787 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 NEMP1O14524 444 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 TPP1O14773 563 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 FFAR2O15552 330 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 CREB3O43889 395 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 LZTS3O60299 673 aaPredicted RBP17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 GZMAP12544 262 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 TIMP2P16035 220 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 TNFAIP3P21580 790 aa17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 DUSP3P51452 185 aaPredicted RBP17.43■□□□□ 0.38
VPS9D1-203ENST00000563798 NDST2P52849 883 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms