RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MUTP22033 750 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 MPSTP25325 297 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ALDH4A1P30038 563 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 CSF2RBP32927 897 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 TXKP42681 527 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 SGSHP51688 502 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 RPS21P63220 83 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ECT2LQ008S8 904 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 CCDC15Q0P6D6 951 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 LLGL1Q15334 1064 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 TCEA2Q15560 299 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 MPP7Q5T2T1 576 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ACOT1Q86TX2 421 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ACRBPQ8NEB7 543 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 KCNN1Q92952 543 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 SLC26A6Q9BXS9 759 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ZNF358Q9NW07 568 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 PDP2Q9P2J9 529 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ITGA11Q9UKX5 1188 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ATP8B3O60423 1300 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 A0A1W2PQH9 124 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 POLR1CO15160 346 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 ALOX15BO15296 676 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 IL18RAPO95256 599 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 GNL1P36915 607 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 GARSP41250 739 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 SMTNP53814 917 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 CENPCQ03188 943 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 IL10RAQ13651 578 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 CES4AQ5XG92 561 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 FCRL6Q6DN72 434 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 KIAA1161Q6NSJ0 714 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 PAQR9Q6ZVX9 377 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 SYVN1Q86TM6 617 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 FAM35AQ86V20 835 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 FAM177A1Q8N128 213 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 DENND6BQ8NEG7 585 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 ZMIZ2Q8NF64 920 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 FIBINQ8TAL6 211 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 FRS2Q8WU20 508 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 STAMBPL1Q96FJ0 436 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 CDK5RAP1Q96SZ6 601 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 DPEP3Q9H4B8 488 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 DNAJB12Q9NXW2 375 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 TMEM9Q9P0T7 183 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 RASAL2Q9UJF2 1139 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 STOML2Q9UJZ1 356 aa10.83□□□□□ -0.68
HDGFL3-204ENST00000563790 PCDH17O14917 1159 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 LPOP22079 712 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 YPEL5P62699 121 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 LAMB3Q13751 1172 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 PITRM1Q5JRX3 1037 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 RNF219Q5W0B1 726 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 SLC39A4Q6P5W5 647 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 CIARTQ8N365 385 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 CSGALNACT2Q8N6G5 542 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 B3GALNT2Q8NCR0 500 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 CT55Q8WUE5 264 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 SMARCD1Q96GM5 515 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 RPL10LQ96L21 214 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 TCEANC2Q96MN5 208 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 NT5C1BQ96P26 610 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 SECISBP2Q96T21 854 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 KCNN3Q9UGI6 736 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 VPS51Q9UID3 782 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 SIX4Q9UIU6 781 aa10.82□□□□□ -0.68
HDGFL3-204ENST00000563790 MCF2LO15068 1137 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 TMEM63AO94886 807 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 TSFMP43897 325 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 GPR3P46089 330 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 STK19P49842 368 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 NDST2P52849 883 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 RBP5P82980 135 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 TFAMQ00059 246 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 DNM1Q05193 864 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 EFEMP1Q12805 493 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 RAPSNQ13702 412 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.81□□□□□ -0.686e-6■■□□□ 12.4
HDGFL3-204ENST00000563790 ADCK5Q3MIX3 580 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 EFHC1Q5JVL4 640 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 ADGRF1Q5T601 910 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 HGSNATQ68CP4 663 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 FAAH2Q6GMR7 532 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 TMEM71Q6P5X7 295 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 DYMQ7RTS9 669 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 ARHGAP22Q7Z5H3 698 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 HID1Q8IV36 788 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 ZADH2Q8N4Q0 377 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 ADAMTS17Q8TE56 1095 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 PLD4Q96BZ4 506 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 RBM15Q96T37 977 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 GPR87Q9BY21 358 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 SNX25Q9H3E2 840 aa10.81□□□□□ -0.68
HDGFL3-204ENST00000563790 TBL1XO60907 577 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 ZWINTO95229 277 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 ALPPP05187 535 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 SLFN14P0C7P3 912 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms