RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FAIMQ9NVQ4 179 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 BAG5Q9UL15 447 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 ZNF711Q9Y462 761 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 COL1A2P08123 1366 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 OR4Q2P0C623 313 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 HNRNPLP14866 589 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNF40-204ENST00000563683 IDO1P14902 403 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 EDNRBP24530 442 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 OR1E1P30953 314 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 RPL14P50914 215 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 CSE1LP55060 971 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 MTTPP55157 894 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 NUP107P57740 925 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 MRPS22P82650 360 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 PCDH20Q8N6Y1 951 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 ZSCAN18Q8TBC5 510 aaPredicted RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 FCRL2Q96LA5 508 aaPredicted RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 SENP6Q9GZR1 1112 aaPredicted RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 PRPF19Q9UMS4 504 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 SNX13Q9Y5W8 968 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 ATP6AP2A0A1C7CYW4 349 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 SCAMP3O14828 347 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 RFPL1O75677 317 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 ATP6AP2O75787 350 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 LRIG2O94898 1065 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 ITGAXP20702 1163 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 STXBP5Q5T5C0 1151 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 MRNIPQ6NTE8 343 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 SMYD1Q8NB12 490 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 PCYOX1LQ8NBM8 494 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 MAF1Q9H063 256 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 COG4Q9H9E3 785 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 COPG2Q9UBF2 871 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 XPR1Q9UBH6 696 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 CDH9Q9ULB4 789 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 H3BNX3 289 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 UBDO15205 165 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PLIN3O60664 434 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 HADHAP40939 763 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 ACADVLP49748 655 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 EMP3P54852 163 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PITX1P78337 314 aaPredicted RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 MRPS6P82932 125 aaKnown RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 DDR2Q16832 855 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 USP41Q3LFD5 358 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PCID2Q5JVF3 399 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 C1QTNF12Q5T7M4 302 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 KLHL35Q6PF15 583 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 ARFGAP1Q8N6T3 406 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 ASIC4Q96FT7 647 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 BIRC8Q96P09 236 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 KLHL5Q96PQ7 755 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 RTKNQ9BST9 563 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 BRD8Q9H0E9 1235 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PIGVQ9NUD9 493 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 UBAP1Q9NZ09 502 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 CD274Q9NZQ7 290 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 DSEQ9UL01 958 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 TMEM221A6NGB7 291 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 RAMP2O60895 175 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 XPAP23025 273 aaPredicted RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 PRKCHP24723 683 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 HARS2P49590 506 aaKnown RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 APOFQ13790 326 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 NFE2Q16621 373 aaPredicted RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 IMPG1Q17R60 797 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 FUT11Q495W5 492 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 FAM171A1Q5VUB5 890 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 FSTL4Q6MZW2 842 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 CYP2R1Q6VVX0 501 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 NCLNQ969V3 563 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PBXIP1Q96AQ6 731 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 CCT7Q99832 543 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 RHOBTB2Q9BYZ6 727 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 POMKQ9H5K3 350 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 STK39Q9UEW8 545 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 SLC30A1Q9Y6M5 507 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PRRC2BQ5JSZ5 2229 aaKnown RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 CDH2P19022 906 aaPredicted RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 IL10P22301 178 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 HOXD10P28358 340 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 SLC5A2P31639 672 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 CD86P42081 329 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 PDE1CQ14123 709 aaPredicted RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 ADGRE1Q14246 886 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 ARHGAP17Q68EM7 881 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 NCBP2-AS2Q69YL0 99 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 HNRNPABQ99729 332 aaKnown RBP10.56□□□□□ -0.72
RNF40-204ENST00000563683 LATS2Q9NRM7 1088 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 CITO14578 2027 aa10.56□□□□□ -0.72
RNF40-204ENST00000563683 STX7O15400 261 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 SRP72O76094 671 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 GLP2RO95838 553 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 MLNP12872 115 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 COX4I1P13073 169 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms